TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCANAAATCCGCGGAAT
TCTCTTGTGTTTCTTGAATCATTTTGTCCTGCTCTGAGTGTTCAAGCTTG
CATGTTGTATGTGAGGATAGGTCAGACTGCTATGGGAACTCTCTAGTGAC
ATACTGTCACGGTCCTTCATTTTGGGCTCATTACTAATGAGTTGATGTGG
AGAGTCGTGTCATCAAGGTCCTTGCTCCTCTTTGAAGGGTCTGGAATCTC
ATGTGACCCCCTCTACTCTTTCTCCAGTACTGCTGAAGGTGAAGAGAGAA
TAGCAAAATGGCATTTATTGTTTGGTATTCAGGCTCTTTGATCTTTCACT
TTAGAATCCAGAAAGGTTGCTATGCTAACATGTCACTGGCTGGAACTCGT
CACAGAGTTCCCCTGGATGTGGCTGGACCGGGCTCCCTCCTCTCAGCTGA
ATCACCAGGGATTTCATTCCTTTTCCACATATCTCTCCCTGTCTTGCCCT
GTCTCCCTGGTGCATATTTGAGAAGGCTGAAGATTATCACACTCATGCCT
TTCTTTAAGAGTCTCCTTGCCCTCCACTGGAGCTGGTTTAGCTCCACCCC
GGGGGCCAAGGTTAGGGAAACAATACTTGTTGGTACTCCTGGGCCCTTTA
TTGGATATTTACGGAAATTTCCCCGGTGCCCCTCCTCCTAAATATGCTTC
AACAAAAATTTTTTTTATTGCCTCCTCCCCCGGGTTTATAAAAAGGTCGT
CCAACACCACCATTCTTTTTCTTC

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGCCCCAGTTCAGCAAGAAGCAAT
TATCATAAGACTATCATCCTAACCCCTTAAGTTGAGGTGGACGGTTTTGG
CTATTTTATGAGTTATCAATATATTGTCATTTTAGGGGATGATTGCAAAT
GAATCATGACCTTGGACAGGGAGGAAATGAAATAGGGAGCTTAGACTCAG
GGATTTCTATCTTTCCTTTCCTCTTCTCTATCCTTCTTTCTTTCTTAGCT
AAAGCAAAGGGGGTTGAGAAGATTAAGGGGGAATTTAGAACTATCCTATA
GAAATAACACAATAAAATGGTAGATTATTGAATCTACTCTTCAACTTAGA
GCTATTACTATTCTCAAATAAGGTTATTTTTGTTTACATTGTTATGTATC
ATAGATTATCCACTCCAGTCTAAGGTTTTCATTAGCATAAATCTTTGTAT
TATTGATACAAATTTAAGGCTTATTTTCTACATCATAATGTAGGTATGTT
TCCAGTCTTGTATAGTGGTGTGCCTATTGTGCCCCCTTTTTATTATAATG
TCTTTTCCCCCTCCTTTTTTTATTTTCATTGCAATTTGCTACAACCCTTC
CCTTTATCCCTTAATAATAAATTCACGCAAAAAAACCTCCCGGTTTTTTC
CCCATCCTCCCGCCTTTTTTACCACACCCCACCCTCTTCGTTTTTTTCCC
CCCCCGTTTCTTTTTTTTTTA

Query= MSMg01no454_l23.b1 MSMg01no454_l23.b1 CHROMAT_FILE:
MSMg01no454_l23.b1 PHD_FILE: MSMg01no454_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:03 2005
         (441 letters)



>mm_chr11_64967219_64968058
          Length = 840

 Score =  816 bits (422), Expect = 0.0
 Identities = 437/442 (98%), Gaps = 3/442 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattttgtcctgctctgagtgttcaagcttgcatgttgtatgtgaggataggtcagactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cattttgtcctgctctgagtgttcaagcttgcatgttgtatgtgaggataggtcagactg 581

                                                                       
Query: 61  ctatgggaactctctagtgacatactgtcacggtccttcattttgggctcattactaatg 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 580 ctatgggaactctctagtgacatactgtcacagtccttcattttgggctcattactaatg 521

                                                                       
Query: 121 agttgatgtggagagtcgtgtcatcaaggtccttgctcctctttgaagggtctggaatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agttgatgtggagagtcgtgtcatcaaggtccttgctcctctttgaagggtctggaatct 461

                                                                       
Query: 181 catgtgaccccctctactctttctccagtactgctgaaggtgaagagagaatagcaaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 catgtgaccccctctactctttctccagtactgctgaaggtgaagagagaatagcaaaat 401

                                                                       
Query: 241 ggcatttattgtttggtattcaggctctttgatctttcactttagaatccagaaaggttg 300
           ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 400 ggcatttattggttggtattcaggctctttgatctttcac-ttagaatccagaaaggttg 342

                                                                       
Query: 301 ctatgctaacatgtcactggctggaactcgtcacagagttcccctggatgtggctggacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctatgctaacatgtcactggctggaactcgtcacagagttcccctggatgtggctggacc 282

                                                                       
Query: 361 gggctccctcctctcagctgaatcaccagggatttcattccttt-tccacatatctctcc 419
           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 281 gggctccctcctctcagctgaatcaccagggatttcatt-ctttctccacatatctctcc 223

                                 
Query: 420 ctgtcttgccctgtctccctgg 441
           ||||||||||||||||||||||
Sbjct: 222 ctgtcttgccctgtctccctgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 840
Length adjustment: 9
Effective length of query: 432
Effective length of database: 831
Effective search space:   358992
Effective search space used:   358992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)