Query= MSMg01no454_o10.b1 MSMg01no454_o10.b1 CHROMAT_FILE:
MSMg01no454_o10.b1 PHD_FILE: MSMg01no454_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:14 2005
(189 letters)
>mm_chr11_81293047_81293635
Length = 589
Score = 232 bits (120), Expect = 9e-66
Identities = 138/144 (95%)
Strand = Plus / Minus
Query: 46 atatatatatgacatattttcccattcagtacatgtctcattagtgatgttcccaagcat 105
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atatatatatgatatattttcccattcagtacatgtctcattagtgatgttcccaagcat 330
Query: 106 ctgatgtcccagatgctatttgtacagggtggctttctttaggatacatttgcttttgtg 165
|||||||||||||| || | || |||| ||||||||||||||||||||||||||||||||
Sbjct: 329 ctgatgtcccagatactgtctgcacagcgtggctttctttaggatacatttgcttttgtg 270
Query: 166 ttattaactttcaccttgaagggg 189
||||||||||||||||||||||||
Sbjct: 269 ttattaactttcaccttgaagggg 246
Score = 58.7 bits (30), Expect = 2e-13
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 20 gtgtgtgtgtgtgtgtgtgtgtgtacatat 49
||||||||||||||||||||||||||||||
Sbjct: 416 gtgtgtgtgtgtgtgtgtgtgtgtacatat 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_o10.g1 MSMg01no454_o10.g1 CHROMAT_FILE:
MSMg01no454_o10.g1 PHD_FILE: MSMg01no454_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:14 2005
(237 letters)
>mm_chr11_81101347_81101983
Length = 637
Score = 426 bits (220), Expect = e-124
Identities = 231/235 (98%)
Strand = Plus / Plus
Query: 1 tgctccagnttttaacatctccgttaagcttctgttacatggaacccttcttcctgactt 60
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tgctccagtttttaacatctccgttaagcttctgttacatggaaaccttcttcctgactt 260
Query: 61 gattccagctagaagtaacggattccttctgcgggcagctgtttttgcatgaaggccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattccagctagaagtaacggattccttctgcgggcagctgtttttgcatgaaggccatt 320
Query: 121 gcattgacacctttgcactttcctgatatgttttattgtgatccacttctttctcatttt 180
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 321 gcattgacacctttgcactttcctgacatgttttattgtgatccacttttttctcatttt 380
Query: 181 tcccatgacctcctccagggaagaaaactgccttgctcctaatgtggagacattg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccatgacctcctccagggaagaaaactgccttgctcctaatgtggagacattg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
