TCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGTTGCTCATTTTTTCCTTACATGAATCCCAAGGCTTGCTTTGTC
TGCTCTCTAAGATTGGATACACTTCCAATCCCAAGGTAAAGAGCCTCTCT
GCCCAAGCTCATGCATCTTCTATCACAATCTTTTAAAAAACCAAACCAAA
CCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAA
TCAAACCCAACCCATGTTCAGCAGAGATGTGCTTGCTTTCCTCTGATTCT
GTGGCATGGAATGATAGCACAAGATGATTCATTTTTATAATTACCTCAAT
ATGGAATTTATAATCACCTCCTGACCTAACTAAGAAAAGGTTCCCATTGA
TACTAATGATTACTGGATAGAAGGAGGATCTATTTCTAGCCTTTGGAAGA
AGCATCAGATTGCTTTCTGCTATGACTGGGTTGCTTTTACTCCAACCTGC
AATGAATGAGGCTTCCAGAGTGTCGGCATCTTTAGCCAACCCTTTAAGAA
AAGTTATTATGACTATCCTAGTAACTACAAAATGTCATATTTCCCAAAGG
AGTAATGGCGACAAGAAGCTTTTAAGTGTCCCTTGTCACTTGTATGCCTT
TGGAGACATTTCTATTCTGATATATGGATCATTTTAAATGTGGCTCTTTA
ATGTTCAGCATGATGTGAAATTGGAGTCTGATTATCTAT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAACAGAGGAATCTTGAATGGCTGAGAA
ACACTTAAAATGTTCAAAGTCCTTAGTGATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACCTTACACCAACCAGAATGGCTAAGATCAAAACC
TTAGCAGACAGCACATGTTGGCAAGGATGTGGAGAAAGAGGAACACTCTT
TCATTGCTGGTGGGATTGCAAACTGGTACAACTACTTTGGAAATCAATCT
GGAAGTTCCTCTATAATATTGGAAATAAATATACCTGAAGACCCAACAAT
ACCACTCTTGGGAATATACCCAAAAGATGCCCCACCTTGCCAGAGGGGAA
CATGTTCTACTATGTTCATAGAACCCTTGTTTGTGACAGCCAGAAGCTGG
AAACAACCCAGATGTCCCACAACAGAAGAATGGATACAGAAAATGTGGTT
AATTTACACAATGGAATACCACTCAGCTATTAAGAATGAGGACATCCTGA
GTTTTGCAGGCAAATGGATGGAACTAGGATATATTATCCTGAGTGAGGTA
ACTCAGACCCAAAAGTACATGCATGGTATATACTCACTAATAAGTGGCTA
ATAAGTGGATATTAGCCCCCCCAAAAGTGTTGAATACCCAAGATAAACCC
ACAGAACTCAAAAAGGTCAGCAAGCTGAAGGGCCCN

Query= MSMg01no455_c17.b1 MSMg01no455_c17.b1 CHROMAT_FILE:
MSMg01no455_c17.b1 PHD_FILE: MSMg01no455_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:36 2005
         (564 letters)



>mm_chr11_7985743_7986706
          Length = 964

 Score = 1021 bits (528), Expect = 0.0
 Identities = 548/564 (97%), Gaps = 15/564 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   attttttccttacatgaatcccaaggcttgctttgtctgctctctaagattggatacact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 attttttccttacatgaatcccaaggcttgctttgtctgctctctaagattggatacact 667

                                                                       
Query: 61  tccaatcccaaggtaaagagcctctctgcccaagctcatgcatcttctatcacaatcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tccaatcccaaggtaaagagcctctctgcccaagctcatgcatcttctatcacaatcttt 607

                                                                       
Query: 121 taaaaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaaccaaacca 180
           ||||               |||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 taaa---------------aaaccaaaccaaaccaaaccaaaccaaaccaaaccaaacca 562

                                                                       
Query: 181 aaccaaatcaaacccaacccatgttcagcagagatgtgcttgctttcctctgattctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccaaatcaaacccaacccatgttcagcagagatgtgcttgctttcctctgattctgtg 502

                                                                       
Query: 241 gcatggaatgatagcacaagatgattcatttttataattacctcaatatggaatttataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatggaatgatagcacaagatgattcatttttataattacctcaatatggaatttataa 442

                                                                       
Query: 301 tcacctcctgacctaactaagaaaaggttcccattgatactaatgattactggatagaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacctcctgacctaactaagaaaaggttcccattgatactaatgattactggatagaag 382

                                                                       
Query: 361 gaggatctatttctagcctttggaagaagcatcagattgctttctgctatgactgggttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggatctatttctagcctttggaagaagcatcagattgctttctgctatgactgggttg 322

                                                                       
Query: 421 cttttactccaacctgcaatgaatgaggcttccagagtgtcggcatctttagccaaccct 480
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cttttactccaacctgcaatgaatgaggcttccagagtgtcagcatctttagccaaccct 262

                                                                       
Query: 481 ttaagaaaagttattatgactatcctagtaactacaaaatgtcatatttcccaaaggagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagaaaagttattatgactatcctagtaactacaaaatgtcatatttcccaaaggagt 202

                                   
Query: 541 aatggcgacaagaagcttttaagt 564
           ||||||||||||||||||||||||
Sbjct: 201 aatggcgacaagaagcttttaagt 178


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)