Query= MSMg01no455_l06.b1 MSMg01no455_l06.b1 CHROMAT_FILE:
MSMg01no455_l06.b1 PHD_FILE: MSMg01no455_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:17 2005
(604 letters)
>mm_chr11_99150794_99151797
Length = 1004
Score = 688 bits (356), Expect = 0.0
Identities = 424/470 (90%), Gaps = 37/470 (7%)
Strand = Plus / Minus
Query: 1 aatatcatataattatgggcagagcgtggggctgacacccctgacatctgtggtctggtc 60
|||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||
Sbjct: 852 aatatcatataattatgggcagagtgtggggctgacacccctggcatctgtggtctagtc 793
Query: 61 atttcttttgagatcctggttactagacatcccctggctagctgccagacacccagaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 atttcttttgagatcctggttactagacatcccctggctagctgccagacacccagaatg 733
Query: 121 tcacatccagatgttctagtccactgaaaactcactatgttcttcaggcttccacttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcacatccagatgttctagtccactgaaaactcactatgttcttcaggcttccacttaca 673
Query: 181 gtgggagga------------------------------------aa-tgccaagaacta 203
||||||||| || ||||||||||||
Sbjct: 672 gtgggaggaagtgccaagaactaatttgttatctttgacgggaggaagtgccaagaacta 613
Query: 204 atttgttatctttgacaaaggcagtggagtgtcacatctgagattgtctggaaataccgg 263
|||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||
Sbjct: 612 atttgttatctttgacaaagacagtggagtgtcacatctgagaatgtctggaaacaccgt 553
Query: 264 ggagtaaggtttactaacaaatcccgaagcctcagtacagaacagaattgtatttaaaca 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggagtaaggtttactaacaaatcccgaagcctcagtacagaacagaattgtatttaaaca 493
Query: 324 catgaaggcaagcctttcatttaattcgataaacaccaccagacagtttgcagatcacag 383
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 492 catgaaggcaagcctttcatttaatccaataaacaccaccagacagtttgcagatcacag 433
Query: 384 aatccagattagcctcctgcacagattcgttcattagaagagaagcaaga 433
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aatccagattagcctcctgcacagattcgttcattagaagagaagcaaga 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_l06.g1 MSMg01no455_l06.g1 CHROMAT_FILE:
MSMg01no455_l06.g1 PHD_FILE: MSMg01no455_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:17 2005
(419 letters)
>mm_chr11_98986680_98987498
Length = 819
Score = 785 bits (406), Expect = 0.0
Identities = 409/410 (99%)
Strand = Plus / Plus
Query: 1 actcttgcagcctggacttgaacttgtgacctcaggcccctgtggagatactatgaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcttgcagcctggacttgaacttgtgacctcaggcccctgtggagatactatgaggat 260
Query: 61 ggcctgacataggaagtgtgaagcgtttatctgcagggcacacaagcatcagaacccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcctgacataggaagtgtgaagcgtttatctgcagggcacacaagcatcagaacccaca 320
Query: 121 tgaaaaagctgtgcccctggaacctcagctctggggaggtagaaaggaggctcttggggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaaaagctgtgcccctggaacctcagctctggggaggtagaaaggaggctcttggggg 380
Query: 181 cttgctgccccagccaattggttcagttcagggagagactcagaaactaaggtggtgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 cttgctgccccagccaattggttcagttcagggagagactcagaaactaaggtggggagt 440
Query: 241 ggttgagaggttagcctctggccttacatacatgcacacatatatgtagccatgtaggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttgagaggttagcctctggccttacatacatgcacacatatatgtagccatgtaggta 500
Query: 301 tacccaagtacacatgcacacagatacagacaggcaggcaagcaggcaggcacgcatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacccaagtacacatgcacacagatacagacaggcaggcaagcaggcaggcacgcatgca 560
Query: 361 cgtgctcacacacacacacacacacacacacacacacacacacacacaca 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgtgctcacacacacacacacacacacacacacacacacacacacacaca 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
