NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAGTATCCTTGAAGGAATTCAGTCTCTTCTTTTTCTAGGAAGCT
GAGCAGTCAGACTGGCCATAAGACACTACTGATAAAAGATGAAGTTACAT
GGAAGTAGGTCTTCTCTGATGAGTCCTGGGCAGTGTGACACTATTGGTTG
AATTATAGAATTTTTGGCTAGTTCTTTTTGCTAATAAACAAACACAGTAA
GGACTTCTACCGGACATCCTGGTGATACCTAATTTACATAGCAATTCAAG
ACCTGCCCTTATTCTTGGTCATGAATGGATCAAGCAAAGGGATGAGTTTG
AAACCTGAAGGAGGCTACAGAGGCCTTGGATAGCTATAGGATGCTCAAGT
ATGGACAAGGAGTCTAGGAGATTGGAATAGAAAATACTCAGTGTCATTCA
AGCCACACAGGGATCCTTGGGGACCACAAGACCTACTGCTTTTCTGGGCC
AAATTTCCACACTTTTACAGATTGTGCCCATTTCTAGCTGGGGTTGGGGT
ATCCTAATCCTTGAATAATCAAATTTTTCTATCACTCAGTCCTTGAGATC
TTCATTGCTATCATTAGCTGTTATTAAATGAGTAGATTGAATAGGCATGA
TAGCACTCTGCATAGATCCCCAAGAACTGGATTCCACCCGAAAACAATGG
GGCCGCTTTGTCTTTAACAAACGG

CGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGTTCTTGTGGTTGTCTTCTTTTAGTTT
TGTTGAGGGATTATCTTCTTGTTTTTTCTAGGGCGTGGTTCCCGTCCTTG
TATTGGTTTTTTTCTGTTATTATCCTTTGAAGGGCTGGATTCGTGGAGAG
ATAATGGGTGAATTTAGTTTTGTCGTGNATTACTTTGTTTTCTCCGTCTA
TGTTTTTCGATAGTTTGTTTGCCTATCTTATCTTGGTTTGTTATCNNCNN
NTTTCTCNNCCCTCTTTTTTTTTTTTTCCTTTTCTTCCTTCTTTCTTTCC
TCTCCTTCTTTTTTTTCTCCCTCCCTTTCTCTTCTTTCTTCTTTTTTTTT
CTTCTTTTCTTTTCCCTTTTCTCCCTTTTCTCTCTTTCCTTCTTTTTCTC
TCCTTTTTTCCTCTCTTTTTTTCTTTTTTTCCCCCTCCTCTCTTCTTTTT
CTTTCTCTTCTTTCTCTTTTCTCTTTCCTTTTCTCCCCCCTTCTTTTCTT
TCTTNTTCCCNTTTCTCTTTCCTCTTTTTTTTTTCTTTCTTTCTTTTTTT
TCCTTTTTCTCTTCTTCTATTTTTCTTACTATTATTTCCCTCTAATCTTC
TCTTCTTTTACATTCATATCTTTCCCCATATTTCTTACTTATATATTTCA
CTTATTCTCAAAATATTATACTTCTATATAATTATACTTTTTATACATTA
TTTTCCCCATTTCTCTTCTATTCTACTTTCTTTATACTTCTTCCTACAAC
CTCTTCATCATCATTATTTCTTTACTTTATACTCCACCCTTTTCCTTTCC
ATTCTATCCTTTTCTCN

Query= MSMg01no456_a07.b1 MSMg01no456_a07.b1 CHROMAT_FILE:
MSMg01no456_a07.b1 PHD_FILE: MSMg01no456_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:41 2005
         (540 letters)



>mm_chr11_18249425_18250364
          Length = 940

 Score = 1021 bits (528), Expect = 0.0
 Identities = 534/536 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagtatccttgaaggaattcagtctcttctttttctaggaagctgagcagtcag 64
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggatccttgaaggaattcagtctcttctttttctaggaagctgagcagtcag 264

                                                                       
Query: 65  actggccataagacactactgataaaagatgaagttacatggaagtaggtcttctctgat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actggccataagacactactgataaaagatgaagttacatggaagtaggtcttctctgat 324

                                                                       
Query: 125 gagtcctgggcagtgtgacactattggttgaattatagaatttttggctagttctttttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtcctgggcagtgtgacactattggttgaattatagaatttttggctagttctttttg 384

                                                                       
Query: 185 ctaataaacaaacacagtaaggacttctaccggacatcctggtgatacctaatttacata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaataaacaaacacagtaaggacttctaccggacatcctggtgatacctaatttacata 444

                                                                       
Query: 245 gcaattcaagacctgcccttattcttggtcatgaatggatcaagcaaagggatgagtttg 304
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcaattcaagacctgcccttatccttggtcatgaatggatcaagcaaagggatgagtttg 504

                                                                       
Query: 305 aaacctgaaggaggctacagaggccttggatagctataggatgctcaagtatggacaagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaacctgaaggaggctacagaggccttggatagctataggatgctcaagtatggacaagg 564

                                                                       
Query: 365 agtctaggagattggaatagaaaatactcagtgtcattcaagccacacagggatccttgg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtctaggagattggaatagaaaatactcagtgtcattcaagccacacagggatccttgg 624

                                                                       
Query: 425 ggaccacaagacctactgcttttctgggccaaatttccacacttttacagattgtgccca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaccacaagacctactgcttttctgggccaaatttccacacttttacagattgtgccca 684

                                                                   
Query: 485 tttctagctggggttggggtatcctaatccttgaataatcaaatttttctatcact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttctagctggggttggggtatcctaatccttgaataatcaaatttttctatcact 740


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space:   492900
Effective search space used:   492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)