ACAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCATCCTCTTCTCTCTGTTTTGTGTTTTAACTTAAATAAGTGAA
ATTTCAGTCAATGTTAAACTGCTCTGAACTAGGCCATTTCCCCAAAATCT
GCTCTATTTCATTCACCTATTCAACTGGCCTCCCCTACCCACCAGTGTGT
TTAGCAACTACTGAGCTGCTCATTGTTTCTACACTTCTAGAAAGACATAC
GAATGATGCCTTGCCTTGTGAGGCCTTTTCAGGGTGTCTTCTGTCCCTTG
ACAATATGCACTTGAGATTCATTTCTTTTTAGTTATGAATGATATTCTAC
TAATCAAAACTCCATTGTTTACCGAAACTTAGGTTTTTTTACTAAAAATT
TAATCCACAAGAAACTTTTTCTCATTCTGAATGTTGTTACCTGGTCCAGA
ACTATCAGTTAAGAGACAAATGAGCTGTTCTGAGGCTGCCATAAACCAAG
TCACCACATGTGTGCAGTTCTTTCTAAACTCTATTTATTTTTGGTTCTTC
TTTCTTTTTTCACCCATACCACCAATTTAATGAAACTACCAAAAAAAATT
CTTAATGCAAGCTGATGCCCAGTTTGGTTTTCTCCTGCCAAAAAACCTTA
AGAAACCCGGGTCCCCTGGGTAAGGGCATTTTTTAATTTAATAACATAAG
AATTACCGTCCTTTATACACCCCCACTTTTTTGTCAAAGGCCGCATATCT
GCGN

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACACCAGATGCTGGCGTGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCATATTTTTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACGGAA
AATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGGCAAATGCATGGACCTGGAGGGCATCTCCCTG
AGTGAGGGAACCCTTTCCCAAAGAAACTCCCCCAATTATGTACTCCCTGA
AAAATGGGATATTACCCCCCCACCTAGGATATCCCCGAAATATAATAAAT
ATTGCCTTATCACCTGGAATCTTTCAAAAAAGGATACCGTTAGGGGGGCT
TCTTTTTCCCTCCCC

Query= MSMg01no456_e22.b1 MSMg01no456_e22.b1 CHROMAT_FILE:
MSMg01no456_e22.b1 PHD_FILE: MSMg01no456_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:05 2005
         (463 letters)



>mm_chr11_7673621_7674482
          Length = 862

 Score =  685 bits (354), Expect = 0.0
 Identities = 427/460 (92%), Gaps = 15/460 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttcatcctcttctctctgttttgtgttttaacttaaataagtgaaatttcagt 63
           ||||||| ||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 218 ggaattcctcaccctcttctctctgttttgtgttttagcttaagtaaatgaaatttcagt 277

                                                                       
Query: 64  caatgttaaactgctctgaactaggccatttccccaaaatctgctctatttcattcacct 123
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 278 caatgttaaactgctctgaactaggccatttccccaaaatctgctgtatttcattcacct 337

                                                                       
Query: 124 attcaactggcctcccctacccaccagtgtgtttagcaactactgagctgctcattgttt 183
           |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 338 attcaacttgcctcccctacccatcagtgtgtttagcaactactgatctgctcattgttt 397

                                                                       
Query: 184 ctacacttctagaaagacatacgaatgatgccttgccttgtgaggccttttcagggtgtc 243
           |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 398 ctacacttctagaaagacatacaaatgatgccttgctttgtgaggccttttcagggtgtc 457

                                                                       
Query: 244 ttctgtcccttgacaatatgcacttgagattcatttctttttagttatgaatgatattct 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
Sbjct: 458 ttctgtcccttgacaatatgcacttgagattcatttctttttagttatgaatgaga---- 513

                                                                       
Query: 304 actaatcaaaactccattgtttaccgaaacttaggtttttttactaaaaatttaatccac 363
                     ||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 514 ----------actccattgtttaccgaaacttatgtttttt-actaaaaatttaatccac 562

                                                                       
Query: 364 aagaaactttttctcattctgaatgttgttacctggtccagaactatcagttaagagaca 423
           ||||||| |||||||||||||||   ||||||||||||||| ||||||||||||||||||
Sbjct: 563 aagaaaccttttctcattctgaacaatgttacctggtccagtactatcagttaagagaca 622

                                                   
Query: 424 aatgagctgttctgaggctgccataaaccaagtcaccaca 463
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatgagctgttctgaggctgccataaaccaagtcaccaca 662


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 862
Length adjustment: 10
Effective length of query: 453
Effective length of database: 852
Effective search space:   385956
Effective search space used:   385956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)