Query= MSMg01no456_k22.b1 MSMg01no456_k22.b1 CHROMAT_FILE:
MSMg01no456_k22.b1 PHD_FILE: MSMg01no456_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:35 2005
(332 letters)
>mm_chr11_99380522_99381251
Length = 730
Score = 590 bits (305), Expect = e-173
Identities = 321/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 tgctcctaaaggcaacaagtgtaagaaaaccattgggtttgggctcaggaagtgtgggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctcctaaaggcaacaagtgtaagaaaaccattgggtttgggctcaggaagtgtgggtc 260
Query: 61 tgcattttggctctcacttgtatcacacacacacactttagtgtaaggtttttttttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcattttggctctcacttgtatcacacacacacactttagtgtaaggtttttttttt-- 318
Query: 121 tctcattttaccaaggttttctggcctggagcaaggttacaagacattgaccctacttat 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tctcattttatcaaggttttctggcctggagcaaggttacaagacattgaccctacttat 378
Query: 181 ctcactagggggcaatcatatgagtccttttgtcatcccggaggtgccgtgtgcaggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctcactagggggcaatcatatgagtccttttgtcatcccggaggtgccgtgtgcaggtta 438
Query: 241 gggctattatttttaatcacattgaatctgaaggtcttttctgggttacttttgataggc 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gggctattaatcttaatcacattgaatctgaaggtcttttctgggttacttttgataggc 498
Query: 301 tatggagtgggaggcttggcgcatgtg 327
||||||||||||||||||| |||||||
Sbjct: 499 tatggagtgggaggcttggtgcatgtg 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 730
Length adjustment: 9
Effective length of query: 323
Effective length of database: 721
Effective search space: 232883
Effective search space used: 232883
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_k22.g1 MSMg01no456_k22.g1 CHROMAT_FILE:
MSMg01no456_k22.g1 PHD_FILE: MSMg01no456_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:35 2005
(244 letters)
>mm_chr11_99518258_99518901
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%)
Strand = Plus / Minus
Query: 1 tctgcagtgccgtatcctccactttgatagttttgagtcggcattaaccgctcatgtcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 539 tctgcagtgccgtatcctccactttgatagttttgagtcggcattaactgctcatgtcaa 480
Query: 61 ctgcaaagagaaatttctttgatgaggcctgagagatgcctattttcttcaggagcacag 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctgcaaagagaaacttctttgatgaggcctgagagatgcctattttcttcaggagcacag 420
Query: 121 gcactgagaagctgccagtgttccaagaaatcacctcctagccatgctcatgctggcagc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 419 gcactgagaagctgccagtgttccaagaaatcacctcctagccacgctcatgctggcagc 360
Query: 181 cttgcttacactcagtaggtcacacccacccatggacaaaggcatgaaagaaagaaggga 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cctgcttacactcagtaggtcacacccacccatggacaaaggcatgaaagaaagaaggga 300
Query: 241 gtgg 244
||||
Sbjct: 299 gtgg 296
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
