CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGTAAGAATGTCATCTATTCAGTAACATTCAAATTCTAGTAGAG
ACAGTGAAACTAATTAGGTATTACTATTTACTCAAACAGAGCTAGAAAAG
CTCTGGGCTAGTCTGTATAGTAATTACTTAGGACAATAGCTGAGTCACAC
CCAAACATAGGACTCACAATGGCCTAGGAAATAGGTGGGTTGCCACATGA
AAGGGTTAGTGGAAGGCAATTACCCTGATTCAGTTTTTTCACTAAGGCCA
GAGGAATAGCGTAATCAGGTATTTACTAAAGAACCCTTGGTGGTGGGTTT
AACAATAGACAAGCATTGCATCAGAGCATTCACCTGGCTCCTGTGTTTAG
CTGATCTTTTTAATTATGGGTTGTTCCTATTCTCAGTAGCCTGGCTCCTG
CCATCTTTTTATGTATGCATTCTTTCTTGTCTTGTGTCAATGTAACTTGG
TTGTCTTGTTTTTCTTCAGTATTAAAAGTCTGGTGTTCCTTTGGAGTAAA
TACATACAGATTCAGCACTCTTCCTTGAGTCTGCATCTGTTTGTCAATTC
TGGAACCTTGTTCACCTGGCACCAGAAACCTGTTCCCCAAAAGAGGTTAG
TCTGTGGCATTTAAGCATATACATTTTATTCAGGGTAAACCAAGGTTATA
TAGAATTTTGGGGGAGGACCGGAGAATATCGAAGGAGTGAAAGGACTTTG
GCTGAAGGGTAAAGCG

NNTTTTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTCAGGAAATGTGAAA
TTCAGGTTAAAACTTATATTTCCAGACTAATACACCCAGTTGAAATTACT
GAAAAAAATGTCAGATTTGTGTCCCTCAATATCAGAAATAGAATCAGTTC
TAATGATACAGAAAGAGTTTTAACATGGTAATGAGGAGTGAGTGCTGAGT
TAATATTCTCTGCTAGGCCCCCCTCACCATGGGCTGTTTGCCAGAACTCC
ACACTTGTTGGCACTGCACTCTCTTACCGATTAAAGATGGGGTACTCTAA
GTCAATCTTTTACCAATTCACAGTCCACTGTCCCTCCAAATTAATATATG
GACATCCAAACTCCCAGTACTTCAGAAAATGGGCTTTTTGTGAATAAGAT
CAATGGACAGCTAATTAGAGTCAGAAGGAGGTCATATTGAAGCTAAATAG
GTTTCTTAGTCCAAGGTAATGGATTTTAATTTGGAACAACACATCATAAT
AGGACAATCTTACAATGAAGCATAAGGAAAGAAATATCAATAAAAATGTT
ATTCACCCTTTGGTAAATTTAGACTCTTTTTTTTTAAATGGATAATGTCC
TTTATTTACTTTTCCAATGTTTAATTACCCCCTTTTCCTTGGTTTCCTTT
TCATGAAACTCCCCAATTGGCTTTTTCCCCCTCCCTTTGTCTCTAATAAA
AATGGT

Query= MSMg01no457_b16.g1 MSMg01no457_b16.g1 CHROMAT_FILE:
MSMg01no457_b16.g1 PHD_FILE: MSMg01no457_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:10 2005
         (459 letters)



>mm_chr11_27331531_27332390
          Length = 860

 Score =  777 bits (402), Expect = 0.0
 Identities = 450/476 (94%), Gaps = 17/476 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgtcaggaaatgtgaaattcaggttaaaacttatatttccagactaatacacccagttg 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 497 ttgtcaggaaatgtgaaattcaggttaaaacttatatttcctgactaatacacccagttg 438

                                                                       
Query: 61  aaattactg-aaaaaaatgtcagatttgtgtccctcaatatcagaaatagaatcagttct 119
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 437 aaattactgaaaaaaaatgtcagatttgtgtccctcaatatcagagatagaatcagttct 378

                                                                       
Query: 120 aatgatacagaaagagttttaacatggtaatgaggagtgagtgctgagttaatattctct 179
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtgatacagaaagagttttaacatggtaatgaggagtgagtgctgagttaatattctct 318

                                                                       
Query: 180 gctaggcccccctcaccatgggctgtttgccagaactccacacttgttggcactgcactc 239
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 317 gctaggcccccctcaccatgggctctttgccagaactccacacttgttggcactgaactc 258

                                                                       
Query: 240 tcttaccgattaaagatggggtactctaagtcaatcttttaccaattcacagtccactgt 299
           ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 257 tcttaccaatgaaagatggggtactttaagtcaatcttttaccaattcacagtccactgt 198

                                                                       
Query: 300 ----------------ccctccaaattaatatatggacatccaaactcccagtacttcag 343
                           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gagttgaataattcccccctccaaattaatatatggacatccaaactcccagtacttcag 138

                                                                       
Query: 344 aaaatgggctttttgtgaataagatcaatggacagctaattagagtcagaaggaggtcat 403
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 137 aaaatgggctttttgtgaataagattaatggacagctaattagagtcagaaggaggtcat 78

                                                                   
Query: 404 attgaagctaaataggtttcttagtccaaggtaatggattttaatttggaacaaca 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  attgaagctaaataggtttcttagtccaaggtaatggattttaatttggaacaaca 22


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 860
Length adjustment: 10
Effective length of query: 449
Effective length of database: 850
Effective search space:   381650
Effective search space used:   381650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)