Query= MSMg01no458_d09.b1 MSMg01no458_d09.b1 CHROMAT_FILE:
MSMg01no458_d09.b1 PHD_FILE: MSMg01no458_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:44 2005
(193 letters)
>mm_chr11_11774690_11775282
Length = 593
Score = 339 bits (175), Expect = 9e-98
Identities = 184/187 (98%)
Strand = Plus / Minus
Query: 1 tactgaggggctgggctagtgggagtcacagctcatgggaagagctgagatggccttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tactgaggggctgggctagtgggagtcacagctcatgggaagagctgagatggccttctt 328
Query: 61 gctgaactgttgccattgctcttaggtcaggcacttggggccttcttctatagaccaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctgaactgttgccattgctcttaggtcaggcacttggggccttcttctatagaccaagc 268
Query: 121 ctagtatgagtgtacccttttctttcattaaatgttgttgtggcaggtttcactggtgtc 180
|||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 ctaggatgagtgtatccttttctttcattaaatgttgttgtggcaggtttcattggtgtc 208
Query: 181 attctgc 187
|||||||
Sbjct: 207 attctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_d09.g1 MSMg01no458_d09.g1 CHROMAT_FILE:
MSMg01no458_d09.g1 PHD_FILE: MSMg01no458_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:44 2005
(581 letters)
>mm_chr11_11610559_11611539
Length = 981
Score = 1011 bits (523), Expect = 0.0
Identities = 569/589 (96%), Gaps = 10/589 (1%)
Strand = Plus / Plus
Query: 1 caggctaaacat--acaaacacctagaaaaagccaagccagtatgaggcttggcagagtc 58
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctaa--atgcacaaacacctagaaaaagccaagccagtatgaggcttggcagagtc 258
Query: 59 caagggaaaagccaatagaaggataggcctgctcaaggctgagctgaaaatgggatgttg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caagggaaaagccaatagaaggataggcctgctcaaggctgagctgaaaatgggatgttg 318
Query: 119 ctaagcaggggaggctaagtccatgactgagcactggacaatctgtgcagaacccagact 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctaagcaggggaggctaagtccatgactgagcactggacaatctgtgcagaacccagaca 378
Query: 179 gaaggaaatgggattgaactctgagaaggtgcattctaggatatgcacccttcagtctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaaggaaatgggattgaactctgagaaggtgcattctaggatatgcacccttcagtctcc 438
Query: 239 ctttgtttgtatttcaatctgatattcatctgccagatctgagagaggctgaccctgtac 298
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctttgagtgtatctcaatctgatattcatctgccagatctgagagaggctgaccctgtac 498
Query: 299 agcctctcagtgagtgcttgcacctaacttttactcttcttagcttagatgagaagagag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcctctcagtgagtgcttgcacctaacttttactcttcttagcttagatgagaagagag 558
Query: 359 aaaacagatacaaaagaaaatctacatttttcattcttctaggaatcctgaaatagtgac 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaacagatacaaaagaaaatctacatttttcattcttctaggaatcctgaaatagtgaa 618
Query: 419 gtgtataaaaatattgatcttggtttttattttgtttggctgtctcctcctcctcctc-- 476
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 619 gtgtataaaaatattgatcttggtttttattttgtttggttgtctcctcctcctcctcct 678
Query: 477 ----ttcctctttctcctcctcttcctcctcctccttcccctcctccccctcctcttcct 532
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 679 cctcttcctcttcctcctcctcttcttcctcctccttcccctcctccccctcctcttcct 738
Query: 533 ccttcccctcttcctgttcttttttctcctcctcttccccctctttcct 581
||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 739 cctccccctcttcctgttcttttttctcctcctcttcctcctctttcct 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|