Query= MSMg01no458_g15.b1 MSMg01no458_g15.b1 CHROMAT_FILE:
MSMg01no458_g15.b1 PHD_FILE: MSMg01no458_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:00 2005
(600 letters)
>mm_chr11_47487328_47488327
Length = 1000
Score = 1145 bits (592), Expect = 0.0
Identities = 598/600 (99%)
Strand = Plus / Minus
Query: 1 cactgagggttatgtaacactacagatatttaggttaggctataggaaagacatatgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cactgagggttatgtaacactacagatatttaggttaggctataggaaagacatatgtaa 741
Query: 61 gtgtttgtgtctgagtgggacacatttgcttatctattacaatgacaggcactgccttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtgtttgtgtctgagtgggacacatttgcttatctattacaatgacaggcactgccttgg 681
Query: 121 gcatcagagatgctacaaggttttaataagatccgcaaagcacagtaattctaaaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcatcagagatgctacaaggttttaataagatccgcaaagcacagtaattctaaaaagca 621
Query: 181 atgaagactgcagtttcacttggaaactgacattcatgaaaaaataataataataacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgaagactgcagtttcacttggaaactgacattcatgaaaaaataataataataacagg 561
Query: 241 acttcgccaaatgcagcagttggccagtcagctctgtgctctgctttaacacactaggca 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 acttcgccaaatgcagcagttggccagtcagctctgtgttctgctttaacacactaggca 501
Query: 301 gtgttacctactgagtatgctatcaaaagtgatggcaaaatgacctttgatttttataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgttacctactgagtatgctatcaaaagtgatggcaaaatgacctttgatttttataag 441
Query: 361 ggatgacttagaaaggtaatttttaattcacataagagcttatttaaagtgttgcattgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggatgacttagaaaggtaatttttaattcacataagagcttatttaaagtgttgcattgg 381
Query: 421 tgtctcctgaggaaattgatgactagttttagttactatatctctcttgctgggtcttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtctcctgaggaaattgatgactagttttagttactatatctctcttgctgggtcttat 321
Query: 481 tagcttacattgtcatcagaaaaatatatgagataccattattgatgacattgtcatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagcttacattgtcatcagaaaaatatatgagataccattattgatgacattgtcatccc 261
Query: 541 ctgtggtctagttatgtggttatccagtcatgtcacatctccatttatatgtgggtctgt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgtggtctagttatgaggttatccagtcatgtcacatctccatttatatgtgggtctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_g15.g1 MSMg01no458_g15.g1 CHROMAT_FILE:
MSMg01no458_g15.g1 PHD_FILE: MSMg01no458_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:00 2005
(280 letters)
>mm_chr11_47443906_47444585
Length = 680
Score = 514 bits (266), Expect = e-150
Identities = 275/278 (98%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 1 atgtattttgatcatcctcatcctccgcccc-cccccttcttccattcccacgctctctc 59
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 200 atgtattttgatcatcctcatcctccgccccacccccttcttccattcccacgctctctc 259
Query: 60 tccttgcccccaacaagcactcacctattttcatgtctttgtgtgtctgggtgttaatgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tccttgcccccaacaagcactcacctattttcatgtctttgtgtgtctgggtgttaatgc 319
Query: 120 atatatatctatgtgtatgtgtgtatgtgtttgtgtgtcagtgtatatgtctgtgtgaac 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 atatatatctatgtgtatgtgtgtgtgtgtttgtgtgtcagtgtatatgtctgtgtgaac 379
Query: 180 caaaatgtacaatggtgatggttacctggaggaatataggtgggaggattattctctgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaaatgtacaatggtgatggttacctggaggaatataggtgggaggattattctctgga 439
Query: 240 gtgtggctgaaccagcgaaaaatatgacccctctctta 277
||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 gtgtggctgaaccagtgaaaaatatgacccctctctta 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
