Query= MSMg01no459_l06.b1 MSMg01no459_l06.b1 CHROMAT_FILE:
MSMg01no459_l06.b1 PHD_FILE: MSMg01no459_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(327 letters)
>mm_chr11_70014473_70015199
Length = 727
Score = 578 bits (299), Expect = e-169
Identities = 320/327 (97%)
Strand = Plus / Plus
Query: 1 tctcccgcgtcctgggctcacaggcatgcacctcctcccaaggtctttttgactggcttg 60
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tctcccgagtcctgggctcacaggcatgcacctcctcacaaggtctttttgactggcttg 260
Query: 61 tttggctggctggctggttggtctttcaaggccaggtctctctgtgtagccctggctgac 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tttggctggctggttggttggtctttcaaggccaggtctctctgtgtagccctggctgtc 320
Query: 121 ctggaacttgctctaaagaccaggctggcctcaaactcacagagatcagcctgcctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggaacttgctctaaagaccaggctggcctcaaactcacagagatcagcctgcctttac 380
Query: 181 ctctggagtgctggaattaaaagcgtgcaccaccacattctgcttgtttgcttgttttta 240
||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 381 ctctggaatgctggaattaaaagcatgcaccaccacattcggcttgtttgcttgttttta 440
Query: 241 attcacttagtgttttcagataaaatatcttgttgtgttgcttctcatggccctaaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcacttagtgttttcagataaaatatcttgttgtgttgcttctcatggccctaaactc 500
Query: 301 tggacttaaccggttctcccaccttaa 327
|||||||||||||||||||||||||||
Sbjct: 501 tggacttaaccggttctcccaccttaa 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_l06.g1 MSMg01no459_l06.g1 CHROMAT_FILE:
MSMg01no459_l06.g1 PHD_FILE: MSMg01no459_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(389 letters)
>mm_chr11_70195324_70196117
Length = 794
Score = 648 bits (335), Expect = 0.0
Identities = 351/359 (97%), Gaps = 5/359 (1%)
Strand = Plus / Minus
Query: 36 caaaaacaaaagcaaaaacaaaaactgccctattgtccaatgacttaaaatatctttaca 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 caaaaacaaaagcaaaaacaaaaactgccctattgtccaatgacttaaaatatctttaca 735
Query: 96 ttttaataatttatatttaatccaaagaagagtcatgtatttgtgtgtgtctgtgtgttc 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttttaataatttatatttaatccaaagaagagtcatgtatttgtgtgtgtctgtgtgttc 675
Query: 156 ttttgagatgatctcacagtggcctggaacactgtgtagaaaaccaggctggccatgaac 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttttgagatgatctcacagtggcctggaacactgtgtagaaaaccaggctggccatgaac 615
Query: 216 tcacacagatctgcctgtctgggactgattatgtaacccaccacgttcagcac-----cc 270
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 614 tcacacagatctgcctgtctgggactgaagatgtaacccaccacgttcagcacacccccc 555
Query: 271 ccccccttgatgctgcttggacacacacctctcctatccttgtggctgggatcttgctat 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ccccccttgatgctgcttggacacacacctctcctatccttgtggctgggatcttgctat 495
Query: 331 catccaggaactccctttgtcaaggtccttgatcgcttccgcttttcctgcttcctgga 389
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 494 catccaggaactccctttgccaaggtccttgatcgcttccgcttttcctgcttcctgga 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 794
Length adjustment: 9
Effective length of query: 380
Effective length of database: 785
Effective search space: 298300
Effective search space used: 298300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
