Query= MSMg01no461_k23.b1 MSMg01no461_k23.b1 CHROMAT_FILE:
MSMg01no461_k23.b1 PHD_FILE: MSMg01no461_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:22 2005
(249 letters)
>mm_chr11_8915952_8916600
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 acctttataagtcattcatgttttcttttctttgtttccagaatgaagcttctgaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acctttataagtcattcatgttttcttttctttgtttccagaatgaagcttctgaatctt 390
Query: 61 tgctatgtgtaaaacttcaaatccttagcaactggggacatccgaagtatacgtgtttgt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 389 tgctatgtgtaaaacttcaaatccttagcaactggggacatccaaagtatacgtgtttgt 330
Query: 121 accgatttagagtccacggcatccccagtgattacacttagaagagctggtgcagaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 accgatttagagtccacggcatccccagtgattacacttagaagagctggtgcagaaggc 270
Query: 181 agtggctgtgcagccagaatgtccaaggatgtttactatttccttacgtcagattgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agtggctgtgcagccagaatgtccaaggatgtttactatttccttacgtcagattgcacc 210
Query: 241 cctaagaat 249
|||||||||
Sbjct: 209 cctaagaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_k23.g1 MSMg01no461_k23.g1 CHROMAT_FILE:
MSMg01no461_k23.g1 PHD_FILE: MSMg01no461_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:23 2005
(431 letters)
>mm_chr11_8775482_8776314
Length = 833
Score = 675 bits (349), Expect = 0.0
Identities = 406/425 (95%), Gaps = 2/425 (0%)
Strand = Plus / Plus
Query: 1 cttccaaataagggcttctctggacagcagagttctttggtttctgagcatccattttca 60
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 201 cttccaaataagggcttctctggacaacagagttctttcgtttctgagcatccattttca 260
Query: 61 ccacataaaacaatgaaaaccttaagacacaagcagatatgagcgctgaggatgtgtcac 120
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ccacatagaacaatgaaaaccttaagacacaagcagatatgagagctgaggatgtgtcac 320
Query: 121 agaggctat-gggtattacctggcctcatttcagctcagtactggtggctcccagcaccg 179
||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 321 agaggctatggggtaatacctggcctcatttcagctcagtactggtggcttccagcactg 380
Query: 180 agtccagctgtggggcctgcatggcttgcagagtcttcacagaccaagatgctgttggca 239
||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||||
Sbjct: 381 agtccagctgtggggcctgtatggcctgcagaatcttcatagaccaagatgctgttggca 440
Query: 240 cgttggcagggcactaggagaggactgcaggacacctgagtgggggcagggctggtgggt 299
|| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaggcaggacactaggagaggattgcaggacacctgagtgggggcagggctggtgggt 500
Query: 300 ggcgtactgatgtccacaagga-cactctaggatagatagcatgctgcattgtgcttatt 358
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgtactgatgtccacaaggagcactctaggatagatagcatgctgcattgtgcttatt 560
Query: 359 actttccatgatatctgtcacacaggaatcttcagctttggtgtggtataattttattaa 418
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttccatggtatctgtcacacaggaatcttcagctttggtgtggtataattttattaa 620
Query: 419 ccttt 423
|||||
Sbjct: 621 ccttt 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 833
Length adjustment: 9
Effective length of query: 422
Effective length of database: 824
Effective search space: 347728
Effective search space used: 347728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
