Query= MSMg01no462_l08.b1 MSMg01no462_l08.b1 CHROMAT_FILE:
MSMg01no462_l08.b1 PHD_FILE: MSMg01no462_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:48 2005
(378 letters)
>mm_chr11_74005402_74006179
Length = 778
Score = 677 bits (350), Expect = 0.0
Identities = 365/374 (97%), Gaps = 8/374 (2%)
Strand = Plus / Minus
Query: 1 gtgaaacctagaacagggttttctgtgctttgctgcgatatgcttacctatactccccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtgaaacctagaacagggttttctgtgctttgctgcgatatgcttacctatactccccat 681
Query: 61 tagtacacttggtaaatacattaacttatgttatttttgttctgcaattaataaaagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tagtacacttggtaaatacattaacttatgttatttttgttctgcaattaataaaagttt 621
Query: 121 atgtagctttttctatggtgaaacatgttatttgtaacaacctaaatctatgtttcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgtagctttttctatggtgaaacatgttatttgtaacaacctaaatctatgtttcatga 561
Query: 181 ccatggctctcatgtttggctcataaagaaactatcttgtggactggagacatggccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccatggctctcatgtttggctcataaagaaactatcttgtggactggagacatggccctg 501
Query: 241 cagttaata----tttttgggtgctctttcagcatactggctgagtattggcagagaggt 296
||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagttaagagcac----tgggtgctctttcagcatactggctgagtattggcagagaggt 445
Query: 297 gacaagcagaattgcctagttgactgggagagagagagagagagagagagagagagagag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacaagcagaattgcctagttgactgggagagagagagagagagagagagagagagagag 385
Query: 357 agagagagagagag 370
||||||||||||||
Sbjct: 384 agagagagagagag 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 24
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_l08.g1 MSMg01no462_l08.g1 CHROMAT_FILE:
MSMg01no462_l08.g1 PHD_FILE: MSMg01no462_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:48 2005
(453 letters)
>mm_chr11_73857534_73858386
Length = 853
Score = 876 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 1 attcctccaactgtgcacttgagcttccagtatgagaatgccaaggacatatgtaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctccaactgtgcacttgagcttccagtatgagaatgccaaggacatatgtaaggat 260
Query: 61 ggcaggacattttaatagccttgtcctgtcttctcacactggatacctctttcctgtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaggacattttaatagccttgtcctgtcttctcacactggatacctctttcctgtcag 320
Query: 121 caccctcttcagggcaccctgtacatctgggttccggaggctgtagatgagtgggtttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccctcttcagggcaccctgtacatctgggttccggaggctgtagatgagtgggtttaa 380
Query: 181 catagggctgaggatagtattgaggatcccaatgcccttgtccttgtctgaggctgagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagggctgaggatagtattgaggatcccaatgcccttgtccttgtctgaggctgagac 440
Query: 241 agaacccagacgcatgtaactgaagaagccagttccataaaagatacagaccacagtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaacccagacgcatgtaactgaagaagccagttccataaaagatacagaccacagtgag 500
Query: 301 gtgggagccgcatgtggaaaatgccttcttcctcccctctgtggagcggatccgtagtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgggagccgcatgtggaaaatgccttcttcctcccctctgtggagcggatccgtagtac 560
Query: 361 tgcagctgcaacgtgggcataggacactgagataagtatcatggggactactcccatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcagctgcaacgtgggcataggacactgagataagtatcatggggactactcccatgaa 620
Query: 421 agtggctcccacaaaaagcagttgcccattgag 453
|||||||||||||||||||||||||||||||||
Sbjct: 621 agtggctcccacaaaaagcagttgcccattgag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
