Query= MSMg01no462_m10.b1 MSMg01no462_m10.b1 CHROMAT_FILE:
MSMg01no462_m10.b1 PHD_FILE: MSMg01no462_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:54 2005
(244 letters)
>mm_chr11_3597882_3598525
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Plus
Query: 1 ttctcctcggnttggtgacatcaccagctggttccctctcagctggctcctgactgttaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ttctcctcggtttggtgacatcaccagctggttccctctcagctggctcctcactgttaa 260
Query: 61 tttgtatttcaggcttatcacaggtgaatggcttgcattttccttctctgattctggatt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtatttcaggcttatcacaggcgaatggcttgcattttccttctctgattctggatt 320
Query: 121 caggtgggctttcaagactcttaacaatgcgcctcacccaagctagcccagaggcccatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 caggtgggctttcaagactcttaacaatgcgcctcacccaagctagcccagaggcccagc 380
Query: 181 cttttggctaaattctgcaggtcattgttcttgatagagtcccgttcttctgcagagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttggctaaattctgcaggtcattgttcttgatagagtcccgttcttctgcagagggg 440
Query: 241 aca 243
|||
Sbjct: 441 aca 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_m10.g1 MSMg01no462_m10.g1 CHROMAT_FILE:
MSMg01no462_m10.g1 PHD_FILE: MSMg01no462_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:54 2005
(288 letters)
>mm_chr11_3773501_3774188
Length = 688
Score = 516 bits (267), Expect = e-151
Identities = 282/291 (96%), Gaps = 8/291 (2%)
Strand = Plus / Minus
Query: 1 ctcagaaatagtcatcagaatgacacattaattatcatccaggttttgaatatgtttcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctcagaaatagtcatcagaatgacacattaattatcatccaggttttgaatatgtttcta 428
Query: 61 ctgtgaaatttcttctttgtcagtgaatgcttttctgggctcatttctttgaagggctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgtgaaatttcttctttgtcagtgaatgcttttctgggctcatttctttgaagggctgg 368
Query: 121 tgagccgtctgcacattcaattccagaaccaaagctgacaatggttaatttgctttcacc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 tgagccgtctgcacattcaattccagagccaaagctgacaatggttaatttgctttcacc 308
Query: 181 ttccttttggcttctttatgtttcttccaacattccaaaaggagactatctgttcaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttccttttggcttctttatgtttcttccaacattccaaaaggagactatctgttcaggct 248
Query: 241 tccc----ttttatttctgctaatactatctcccacaccactccagaataa 287
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcccaaga----atttctgctaatactatctcccacaccactccagaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
