Query= MSMg01no463_a23.b1 MSMg01no463_a23.b1 CHROMAT_FILE:
MSMg01no463_a23.b1 PHD_FILE: MSMg01no463_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:18 2005
(497 letters)
>mm_chr11_96613705_96614601
Length = 897
Score = 516 bits (267), Expect = e-150
Identities = 314/335 (93%), Gaps = 12/335 (3%)
Strand = Plus / Minus
Query: 166 aggactagaatgtcaggtatgcatcactacacaaatgctttttaaaaatctttcctctgt 225
||||||||||| | |||||||||||| ||||| ||||||||||||||||||| |
Sbjct: 897 aggactagaattttaggtatgcatca------aaatgttttttaaaaatctttcctc--t 846
Query: 226 ctctctc---tatttttttgagacaggatcttactatatagcctcgattggcctagaact 282
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ctctctcttttatttttttgagacaggatcttactatatagcctcgattggcctagaact 786
Query: 283 cactatgtagaccagtgcagatttaaaggcataaagtaccacatcttgcttttcttcttt 342
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 785 cactatgtagaccggtgcagatttaaaggcataaagtaccacgtcttgcttttcttcttt 726
Query: 343 taaaaataattttataatttttttaaaggttgacttttattatttttaatcatgtgcgtg 402
||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 725 taaaaataattttatta-ttttttaaagattgacttttattatttttaatcatgtgcgtg 667
Query: 403 ggggtctggggacatatgtgagtacaggtgcccttggtgggcaaaggagtcagatctccc 462
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 666 ggggtctggggacatatgtgagtacaggtgcccttggtaggcagaggagtcagatctccc 607
Query: 463 tagagagtgtcaaaggtggttgtgagtcacctgat 497
|||||||||||||||||||||||||||||||||||
Sbjct: 606 tagagagtgtcaaaggtggttgtgagtcacctgat 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_a23.g1 MSMg01no463_a23.g1 CHROMAT_FILE:
MSMg01no463_a23.g1 PHD_FILE: MSMg01no463_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:18 2005
(434 letters)
>mm_chr11_96443200_96444033
Length = 834
Score = 824 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Plus
Query: 1 acaatgaaaagaacggtactgacagttcataattagtgtcttcaccctgtctgccagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaatgaaaagaacggtactgacagttcataattagtgtcttcaccctgtctgccagagc 260
Query: 61 cctcagcaaaggtgtgcctgtaccctgtcggtttgagagaaggggtgggggggagccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcagcaaaggtgtgcctgtaccctgtcggtttgagagaaggggtgggggggagccacc 320
Query: 121 ttgtggctggaagacgatccagcagcctctatgacccttgctggttctcagcaggcaggg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ttgtggctggaagacgatccagcagcctgtatgacccttgctggttctcagcaggcaggg 380
Query: 181 gaggggggatgagcacagcagccagtgataaatcagaaatatcaatcactaaatatctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggggggatgagcacagcagccagtgataaatcagaaatatcaatcactaaatatctgt 440
Query: 241 ggaaagtggtaatagttataaatagaatctataactacgataacactgaagctgtagttg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaagtggtaagagttataaatagaatctataactacgataacactgaagctgtagttg 500
Query: 301 taaatatacattatcctctttaatatgacacaggatagattgagaactgaggaattatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaatatacattatcctctttaatatgacacaggatagattgagaactgaggaattatta 560
Query: 361 agaccccaccaaaaaaaaattggaagaaagaatgaaaacatttaagttaaaattatgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaccccaccaaaaaaaaattggaagaaagaatgaaaacatttaagttaaaattatgttc 620
Query: 421 attttgtaattcaa 434
||||||||||||||
Sbjct: 621 attttgtaattcaa 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
