TATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGACTCATAGTGCTGATTTTTTAGAAAGAGATTTANAAGCACAGTAG
TATATGGAACATTTTGAAACGCANATAGGTAAGTGTTGCATGTGCTCATT
CTTCTAATTATTGACACATTCATTCATTCATTATTCATTCTTAGCTGTGG
AAAACTAGAAAATCAGCAAGATTGAGTTAAGGTTATGCATGGTTAATATA
ATCATCTGTAGTGAATAGATGTCCTAGAAAAAAATGTGATTAGGTCTAGG
TACCACCAGTGTTTAGTAATGACTGAAGTCCTGGATATAAATGAATTTGC
CTGCAGCAATATAGAAATCAAAGTGAAGAAAGACTATAACTGAGCATCAA
AGAATTCTAGTGATCTAAAAAAGAAACTTAAAATAGTACAAAAAGGACAC
ACAGGAAATGTTACTATGGAAGTTACTGAAAGGCAGAGAATATAATTTTT
TATATGTAGGGGAGTGGGGGAGGAGGGTATGCNCCCCCCTCCCCCCCCCC
CCCCNCCCCCCCCCCCCCCCCTCCCCTTTTTTTTCCTTTCCCCCCCCCTT
TTCTCCCCTTCTTTTCTTTTCCCTCTCCCCTTTCTTTTTCTTCTCTTCCC
TCTTCCTCTTTTTCTTTTTTTTTCCCCCCTTTTTTCTTTCCTCTCTTCTT
CTCTTTTCCTTCCTTTTTTTCCTTTTCTTTTCCTTCTTCTTTCCTCCCCT
TTTTCTTTTTCCCCTATTTTTCC

ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAAGAATACTGAATGGCAGGGA
AGAACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAATAACCCTAAGATTACACCTCACACCAGTCAGAATGGGTAAGATCAA
AATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACT
CCTCCTTTTTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAG
TCTGGCGGTTCCTCTGAAAATTGGACATAGTACTACTGGAGGATCCCGCA
ATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACCGTTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCT
GGAAAAAACCCAGATGCCCCTCAACGGAAGAATGGATACAGAAAATGTGG
CACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GAAATTCCTAGNCAAATGTTTGGACCTGGAGGGCATAATCCTGAGTGAGG
TAACCCAGTCCCAAAAGAACTCACACCATATGTACTCCCTGATTAGTGGA
TATTAGCCCCGAAACTTAGGATACCCCCGAAATAAGATACAATTTGGCTA
ATGGGTGAAACTCCCGGAAAAAGAAGAACAAAGTGGGGAACCTTTGCCCC
CTCTTTAAATTTTGAAAAACACCCCCCCA

Query= MSMg01no464_b23.b1 MSMg01no464_b23.b1 CHROMAT_FILE:
MSMg01no464_b23.b1 PHD_FILE: MSMg01no464_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:46 2005
         (440 letters)



>mm_chr11_15807215_15808054
          Length = 840

 Score =  766 bits (396), Expect = 0.0
 Identities = 422/433 (97%), Gaps = 6/433 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcacagtagtatatggaacattttgaaacgcanataggtaagtgttgcatgtgctcatt 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 201 agcacagtagtatatggaacattttgaaacgcaaataggtaagtgttgcatgtgcacatt 260

                                                                       
Query: 61  cttctaattattgacacattcattcattcattattcattcttagctgtggaaaactagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctaattattgacacattcattcattcattattcattcttagctgtggaaaactagaa 320

                                                                       
Query: 121 aatcag---caagattgagttaaggttatgcatggttaatataatcatctgtagtgaata 177
           ||||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 aatcagtagcaagattgagttaaggttatgcatagttaatataatcatctgtagtgaata 380

                                                                       
Query: 178 gatgtcctagaaaaaaatgtgattaggtctaggtaccaccagtgtttagtaatgactgaa 237
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgtcctagaaaaaa-tgtgattaggtctaggtaccaccagtgtttagtaatgactgaa 439

                                                                       
Query: 238 gtcctggatataaatgaatttgcctgcagcaatatagaaatcaaagtgaagaaagactat 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcctggatataaatgaatttgcctgcagcaatatagaaatcaaagtgaagaaagactat 499

                                                                       
Query: 298 aactgagcatcaaagaattctagtgatctaaaaaagaaacttaaaatagtacaaaaagga 357
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactgagcatcaaagaattgtagtgatctaaaaaagaaacttaaaatagtacaaaaagga 559

                                                                       
Query: 358 cacacaggaaatgttactatggaagttactgaaaggcagagaatataattttttatatgt 417
           ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 560 caca--ggaaatgttactatggaagttactgaaaggcagagaatataattttgtatatgt 617

                        
Query: 418 aggggagtggggg 430
           |||||||||||||
Sbjct: 618 aggggagtggggg 630


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)