Query= MSMg01no464_c21.b1 MSMg01no464_c21.b1 CHROMAT_FILE:
MSMg01no464_c21.b1 PHD_FILE: MSMg01no464_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:51 2005
(313 letters)
>mm_chr11_37733352_37734063
Length = 712
Score = 543 bits (281), Expect = e-159
Identities = 305/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 1 ctgaaggtgaggtagaaggaaaactgccaccaatgcctgttgtccctacaaggaacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaaggtgaggtagaaggaaaactgccaccaatgcctgttgtccctacaaggaacaaat 260
Query: 61 gaccttatcctcagtgttatgtgagatcttactgtgcatgccatcacctctagagacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccttatcctcagtgttatgtgagatcttactgtgcatgccatcacctctagagacata 320
Query: 121 ggactttttcacttagggaacatcttctcagttcttgcttgcacaattgaatgaggtatg 180
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ggactttttcacttcgggaatatcttctcatttcttgcttgcacaattgaatgaggtatg 380
Query: 181 cacaggtgatagagtactccaccttaaatgtgttttgactttgtcttcttcatatagtct 240
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 cacaagtgatagagtactccaccttaaatgtgttttgactttgtcttattcatatagtct 440
Query: 241 ttaactgtatccttacttgattcaaaagtgattccttctcaggatcttttgccccaaatc 300
||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 441 ttaaccgtatccttacttgattcaaa-gtgattccatctcaggatcttttgccccaaatc 499
Query: 301 tagatagctttat 313
|||||||||||||
Sbjct: 500 tagatagctttat 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_c21.g1 MSMg01no464_c21.g1 CHROMAT_FILE:
MSMg01no464_c21.g1 PHD_FILE: MSMg01no464_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:51 2005
(346 letters)
>mm_chr11_37922731_37923476
Length = 746
Score = 600 bits (310), Expect = e-176
Identities = 337/346 (97%)
Strand = Plus / Minus
Query: 1 ctgctactggtcaggacatcatagagaggcactgagggattattgtcattgactctaaca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctgctgctggtcaggacatcatagagaggcactgagggattattgtcattgactctaaca 359
Query: 61 gtaaggccaagggaagaagagaggggaaaaagagggtagcaacataggatgaattcatat 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtaaggccaagggaagaagagaggggaaaaagagggtagcaacataggatgaattcatac 299
Query: 121 aaatggaaaagctctctaatatactgaaatttccacaaacaataaggtaaaaatagggtt 180
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 298 aaatggaaaagctctctaatatactgaaatttctacaaacattaaggtaaaaatagggtt 239
Query: 181 tacgtatgcagcagtcaggatgaatgaatattttacatagctacatatgtagcagaggat 240
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 238 tacatatgcagcagtcaggatggatgaatattttacatagctacatatgtagcagaggat 179
Query: 241 tgtcttatctggcatcaatgggaggggagacccttggtcctgtggagactcaatgcccca 300
|||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 178 tgtcttatctggcatcaatgggagggtacacccttggtcctttggagactcaatgcccca 119
Query: 301 gtgtaaggggatcctagagtggtgaggtgggaatggggcaggtgtg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gtgtaaggggatcctagagtggtgaggtgggaatggggcaggtgtg 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
