Query= MSMg01no464_d17.b1 MSMg01no464_d17.b1 CHROMAT_FILE:
MSMg01no464_d17.b1 PHD_FILE: MSMg01no464_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:55 2005
(590 letters)
>mm_chr11_54484214_54485203
Length = 990
Score = 1079 bits (558), Expect = 0.0
Identities = 583/592 (98%), Gaps = 2/592 (0%)
Strand = Plus / Plus
Query: 1 agtgcataactgcataagtgtacaccaccacacaccacccctgctttgttacctctttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 agtgcataactgcataagtgtacaccaccacacaccacccctgctttgttacctctttat 258
Query: 61 tttccaagttgaatttgctagtcaatttttcttgtaaaatacttccttagagaaatttct 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 259 tttccaagttgaatttgctagtcaatttttctcctaaaatacttccttagagaaatttct 318
Query: 121 tcacttagaaatggatttacatatctgtatgttccttgtaatttttcagcatttaaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcacttagaaatggatttacatatctgtatgttccttgtaatttttcagcatttaaagga 378
Query: 181 gtggttccaaaagtgtgtagagact--gttcttaagaccagtccctacacttccaaagac 238
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 379 gtggttccaaaagtgtgtagagactctgttcttaagaccagtccctacacttccaaagac 438
Query: 239 agaatagtttgtttgaatggaacacgtcgtgttccataaactgcttagtaacaccatcct 298
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaatagaaagtttgaatggaacacgtcgtgttccataaactgcttagtaacaccatcct 498
Query: 299 ttaatagtaggcagtggtggctcacatctttgattccagtgctcgggagtcaggtggatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttaatagtaggcagtggtggctcacatctttgattccagtgctcgggagtcaggtggatc 558
Query: 359 tctctgcatttgagttcagccatgtatacagaatgagttccaggacctccagggctatat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tctctgcatttgagttcagccatgtatacagaatgagttccaggacctccagggctatat 618
Query: 419 agagaaaccctctcttagaaaacaaacaaacaaaaacaaaaacaaaaaaatcaactaatg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agagaaaccctctcttagaaaacaaacaaacaaaaacaaaaacaaaaaaatcaactaatg 678
Query: 479 gctagatgggtgttaaaaatgcagttgatctaaagcatgttttaaagtacatgctatata 538
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 679 gctagacgggtgttaaaaatgcagttgatctaaagcatgttttaaagtacatgctataga 738
Query: 539 ggtgtctggccttcaggactcaatgtgtccttcccagtccttcatttcatta 590
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggtgtctggccttcaggactcaatgtgtccttcccagtccttcatttcatta 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_d17.g1 MSMg01no464_d17.g1 CHROMAT_FILE:
MSMg01no464_d17.g1 PHD_FILE: MSMg01no464_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:55 2005
(473 letters)
>mm_chr11_54620708_54621580
Length = 873
Score = 673 bits (348), Expect = 0.0
Identities = 360/368 (97%), Gaps = 8/368 (2%)
Strand = Plus / Minus
Query: 1 tagactagcactagcccacatagtgaattcaaagcaactgttgtctacatgagaccctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tagactagcactagcccacatagtgaattcaaagcaactgttgtctacatgagaccctgc 305
Query: 61 tctgcccactcccaaaagcataaaaacatatcatttgattaatgactctagcggaaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tctgcccactcccaaaagcataaaaacatatcatttgattaatgactctagcggaaccac 245
Query: 121 agttcttcataggaagaaccaagtcaggcccagaactagaacaaggactgaggagatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agttcttcataggaagaaccaagtcaggcccagaactagaacaaggactgaggagatgtc 185
Query: 181 tctgtggtaagagcacttctgggcaaacatgaagacctgagtttgaatctcagcacctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tctgtggtaagagcacttctgggcaaacatgaagacctgagtttgaatctcagcacctac 125
Query: 241 ata----attttagtggtgtggctatggatgcctgtagtcccagagctgtgggtgtcaga 296
||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ataaaaca----agtggtgtggctatggatgcctgtagtcccagagctgtgggtgtcaga 69
Query: 297 gcaggaggacctgtgaggcttgctggctgccagtctagctccaagttcaatgggagaccc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gcaggaggacctgtgaggcttgctggctgccagtctagctccaagttcaatgggagaccc 9
Query: 357 tgcctcaa 364
||||||||
Sbjct: 8 tgcctcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
