Query= MSMg01no465_n21.b1 MSMg01no465_n21.b1 CHROMAT_FILE:
MSMg01no465_n21.b1 PHD_FILE: MSMg01no465_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:08 2005
(527 letters)
>mm_chr11_74724465_74725391
Length = 927
Score = 973 bits (503), Expect = 0.0
Identities = 521/527 (98%)
Strand = Plus / Plus
Query: 1 atgacaggtatgagggctgtctaggatagaaacttagatcattttgcttacactcaaacg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgacagatatgagggctgtctaggatagaaacttagatcattttgcttacactcaaacg 260
Query: 61 ggcagctctgtactactttcgacactaccctgagaaagttatgtaccttccagtttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcagctctgtactactttcgacactaccctgagaaagttatgtaccttccagtttagca 320
Query: 121 gcataggtgagagcttggccatggtttccgctgctgtgagtaactacggctttgggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcataggtgagagcttggccatggtttccgctgctgtgagtaactacggctttgggcttc 380
Query: 181 tcttctggcgtgtcaggaattaagcctctgatggcattaagggcacctcgaatctggacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttctggcgtgtcaggaattaagcctctgatggcattaagggcacctcgaatctggacg 440
Query: 241 agatatttttttataaatggtgcatttctaacaatgggaacatgttcagagacatgcatt 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatagtaaattataaatggtgcatttctaacaatgggaacatgttcagagacatgcatt 500
Query: 301 cacttgtttattagacaaactgtagagagtatttacacaaacagcctgctatacacttga 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacttgtttattatacaaactgtagagagtatttacacaaacagcctgctatacacttga 560
Query: 361 ggctacatgatagacactattgcttgaaagcaataaactcaagcatgtaaaaataatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctacatgatagacactattgcttgaaagcaataaactcaagcatgtaaaaataatgag 620
Query: 421 aaataatagtacaggcaattataatacaatggcatatacaaaaggttaaaatggtattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaataatagtacaggcaattataatacaatggcatatacaaaaggttaaaatggtattac 680
Query: 481 acagcacatttttctcctttttattacttttatgtgtgtgaaagttt 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagcacatttttctcctttttattacttttatgtgtgtgaaagttt 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_n21.g1 MSMg01no465_n21.g1 CHROMAT_FILE:
MSMg01no465_n21.g1 PHD_FILE: MSMg01no465_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:08 2005
(468 letters)
>mm_chr11_74958564_74959425
Length = 862
Score = 878 bits (454), Expect = 0.0
Identities = 462/468 (98%), Gaps = 6/468 (1%)
Strand = Plus / Minus
Query: 1 atggtactgtgggggaaaaggcccacaaataactgtaatgtgagacatgatagcagtcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 atggtactgtgggggaaaaggcccacaaataactgtaatgtgagacatgatagcagtcct 800
Query: 61 acaaatgagatataaatcaactctgcaggaaccctagagcacagagacaaattcctcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 acaaatgagatataaatcaactctgcaggaaccctagagcacagagacaaattcctcctg 740
Query: 121 ggagaaatcagggaaggcttcactggggagatggagtttcattggggaattcagggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggagaaatcagggaaggcttcactggggagatggagtttcattggggaattcagggaaaa 680
Query: 181 tagaatttcaacaggtaacaggaaatgtggagcaaaaaaagagtcctttggattgagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tagaatttcaacaggtaacaggaaatgtggagcaaaaaaagagtcctttggattgagaga 620
Query: 241 cagactggacaaagatctaaaagtaggaaagggcagagcgtaaggcagtgagtagagagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cagactggacaaagatctaaaagtaggaaagggcagagcgtaaggcagtgagtagagagg 560
Query: 301 aaggttactgtcactgtcactgtcactgtctgggcaggagtcttgatggctggacagaca 360
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaggtt------actgtcactgtcactgtctgggcaggagtcttgatggctggacagaca 506
Query: 361 ctttatacactcgtcctaaggacgcacagcaactatgaggcaggtgctgtgctgagttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttatacactcgtcctaaggacgcacagcaactatgaggcaggtgctgtgctgagttta 446
Query: 421 ctttacagacttagaaacaggctcacagaagttgaccactttgcccag 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctttacagacttagaaacaggctcacagaagttgaccactttgcccag 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 862
Length adjustment: 10
Effective length of query: 458
Effective length of database: 852
Effective search space: 390216
Effective search space used: 390216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
