Query= MSMg01no466_l06.b1 MSMg01no466_l06.b1 CHROMAT_FILE:
MSMg01no466_l06.b1 PHD_FILE: MSMg01no466_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:17 2005
(236 letters)
>mm_chr11_49208407_49209042
Length = 636
Score = 391 bits (202), Expect = e-113
Identities = 223/230 (96%)
Strand = Plus / Plus
Query: 1 gaaagccaagctattggagttccctgtgtatcatgtttacagctaaactattgaaaagtc 60
|||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 201 gaaagccaagctattggagttccctgtgtatcatgtaaagagataaactattgaaaagtc 260
Query: 61 tcctcttcctgagaaattattgtttcaacaatcttggagagggacccatgagttgtgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcttcctgagaaattattgtttcaacaatcttggagagggacccatgagttgtgtaa 320
Query: 121 gtttcatgagcctctgagtcttgggagtttcacctaagttttataattttgttgagcttc 180
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 321 gtttcatgagcctctgagtcttgggagtttcacctaagttttataagcttggtgagcttc 380
Query: 181 ctgtctccttcctgtagaggaaacaactacacagcattaacttaaaaaaa 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtctccttcctgtagaggaaacaactacacagcattaacttaaaaaaa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no466_l06.g1 MSMg01no466_l06.g1 CHROMAT_FILE:
MSMg01no466_l06.g1 PHD_FILE: MSMg01no466_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:17 2005
(361 letters)
>mm_chr11_52029490_52030250
Length = 761
Score = 582 bits (301), Expect = e-170
Identities = 346/361 (95%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 1 ctttatttctgtcagtttttaaaattgcattgagcgtctggtatgctcttttaccccggt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctttatttctgtcagtttt-aaaattgcattgagcgtctggtatgctcttttaccccggt 260
Query: 61 ggctctcacactgtgggttgtgacccctttggggattacatatcagaagcaaaattgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctctcacactgtgggttgtgacccctttggggattacatatcagaagcaaaattgcag 320
Query: 121 ctatgaagtagcaacaaaataattttatggttgggggtcaccatagcacaaggaactgta 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatgaagtagcagcaaaataattttatggttgggggtcaccatagcacaaggaactgta 380
Query: 181 ataaagggtcacagcagtaggaaggtcatgaattgggaagggttagatggtcgaattttc 240
|||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 381 ataaagggtcacagcactaggaaggtcatgaattgggaaggtttagatggttgaattttc 440
Query: 241 ttacagttgattttactccatcctgcttaaatttgacatcttttatttacctgtcttgga 300
|||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 441 aaacagttgattttactccatcctgcttaaatccgtcaccttttatttacctgtcttgga 500
Query: 301 gaaagtggatatacatgtgcagaaatatcaaaatagaccatcgcccacctcatgtataaa 360
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 aaaactggatgtacatgtgcagaaatatcaaaatagaccatcgcccacctcatgtacaaa 560
Query: 361 t 361
|
Sbjct: 561 t 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
