Query= MSMg01no467_m03.b1 MSMg01no467_m03.b1 CHROMAT_FILE:
MSMg01no467_m03.b1 PHD_FILE: MSMg01no467_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:43 2005
(191 letters)
>mm_chr11_103483681_103484272
Length = 592
Score = 348 bits (180), Expect = e-100
Identities = 189/192 (98%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 1 caaggtccttttggctctatgttgctaataacctagaggttatactatgctactgtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 caaggtccttttggctctatgttgctaataacctagaggttatactatgctactgtcttt 260
Query: 61 ccttaatctaggaaaatggaatgatatattctttttttttaa-tgtaccatgctatgttc 119
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ccttaatctaggaaaatggaatgatatattctttttttttaaatgtaccatgctatgttc 320
Query: 120 attgagccataacatggctttttttttaattaggtattttcctcgtttacattttcattg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 attgagccataacatggctttttttttaattaggtattttcctcgtttacattttcaatg 380
Query: 180 ctatcccaaagg 191
||||||||||||
Sbjct: 381 ctatcccaaagg 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 592
Length adjustment: 8
Effective length of query: 183
Effective length of database: 584
Effective search space: 106872
Effective search space used: 106872
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_m03.g1 MSMg01no467_m03.g1 CHROMAT_FILE:
MSMg01no467_m03.g1 PHD_FILE: MSMg01no467_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:43 2005
(243 letters)
>mm_chr11_103672054_103672696
Length = 643
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 agaccctagttagtattctctttgtggatgggcaagctgagttcagagctgcagggctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agaccctagttagtattctctttgtggatgggcaagctgagttcagagctgcagggctac 383
Query: 61 taagatggaggggtctatggtgggaccggaatgctctctgaagagctaggttggccacgc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 382 taagatggaggggtctatggtgggaccggaatgctctctgaagagttaggttggccacgc 323
Query: 121 cctgtccttgggctcttggcctccaaccttgcacattcagaaacactcctcctaacagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cctgtccttgggctcttggcctccaaccttgcacattcagaaacactcctcctaacagtt 263
Query: 181 ctgagtcctccattctggagactggaacctgcagcctataacctactaatccactcgttc 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 262 ctgagtcctccattctggagactggaacctgcagcctaaaacctactaatccactcgttc 203
Query: 241 ca 242
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
