Query= MSMg01no468_m02.b1 MSMg01no468_m02.b1 CHROMAT_FILE:
MSMg01no468_m02.b1 PHD_FILE: MSMg01no468_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:05 2005
(177 letters)
>mm_chr11_52737637_52738211
Length = 575
Score = 298 bits (154), Expect = 1e-85
Identities = 169/176 (96%), Gaps = 6/176 (3%)
Strand = Plus / Plus
Query: 4 ggaattctccttcta--ttatcggaaattgtaatagcagaacagcatggacagatgggat 61
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccttctagatt---ggaaattgtaatagcagaacagcatggacagatgggat 260
Query: 62 ttgagtaggtgatttgtgtaaccagtctgtaattcaccacagggtttggttcccagtagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagtaggtgatttgtgtaaccagtctgtaattcaccacagggtttggttcccagtagt 320
Query: 122 ttatcacgatgaagtcacttgatcctctagaaacaaacgattcctttgtctccatg 177
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ttatcacgatgaagtcacttgatcctctagaaacaaaa-attcctttgtctccatg 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 575
Length adjustment: 8
Effective length of query: 169
Effective length of database: 567
Effective search space: 95823
Effective search space used: 95823
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_m02.g1 MSMg01no468_m02.g1 CHROMAT_FILE:
MSMg01no468_m02.g1 PHD_FILE: MSMg01no468_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:05 2005
(250 letters)
>mm_chr11_52899287_52899936
Length = 650
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%)
Strand = Plus / Minus
Query: 1 acctagacgggtttagcatcagctattaatgctgggttattacctgaaattaatgatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acctagacgggtttagcatcagctattaatgctgggttattacctgaaattaatgatgtg 391
Query: 61 gctttcagaagccagctctgctgcatgctgtgaacccactgcggcactcgggcttctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gctttcagaagccagctctgctgcatgctgtgaacccactgcggcactcgggcttctgag 331
Query: 121 ttgtgatgtctctgcactgcgaactggcacagtgccctgaccacatggcagatgtccatc 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 330 ttgtgatgtctctgcactgcgaactggcacagtgctctgaccacatggcagatgtccatc 271
Query: 181 ctgggtgggcttccccaccttgagccctggaccatttccctcagtaggtaatttgtagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctgggtgggcttccccaccttgagccctggaccatttccctcagtaggtaatttgtagat 211
Query: 241 atagggacag 250
||||||||||
Sbjct: 210 atagggacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
