MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-468N19
Chromosome	11 (Build37)
Map Location	43,376,630 - 43,376,801
singlet/doublet	singlet
Overlap gene	Ccnjl
Upstream gene	Gabrb2, Atp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2
Downstream gene	Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b, Il12b, Ublcp1, 3732413I11Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gabrb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14401 MGI:95620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp10b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319767 MGI:2442688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG544767 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Pttg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30939 MGI:1353578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slu7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	C1qtnf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69183 MGI:1916433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnjl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fabp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4631424J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins

name	Ttc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66827 MGI:1914077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il12b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16160 MGI:96540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ublcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79560 MGI:1933105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3732413I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74315 MGI:1921565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabrb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301234 GeneID:14401 MGI:95620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 transcript_id : NM_008070.3

name	Atp10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628643 GeneID:319767 MGI:2442688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Class V, type 10B transcript_id : NM_176999.3

name	EG544767 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390054 GeneID:544767 MGI:3646984
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG544767 transcript_id : XM_622131.3

name	Pttg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305426 GeneID:30939 MGI:1353578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pituitary tumor-transforming 1 transcript_id : NM_013917.1

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812155 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_148673.3

name	Slu7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39812172 GeneID:193116 MGI:2385598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLU7 splicing factor homolog (S. cerevisiae) transcript_id : NM_198936.1

name	C1qtnf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801860 GeneID:69183 MGI:1916433
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 2 transcript_id : NM_026979.2

name	Ccnjl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865890 GeneID:380694 MGI:2685723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin J-like transcript_id : NM_001045530.1

name	Fabp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680440 GeneID:16204 MGI:96565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid binding protein 6, ileal (gastrotropin) transcript_id : NM_008375.1

name	4631424J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261857 GeneID:70802 MGI:1918052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 67 ESTs, 2 Proteins product : RIKEN cDNA 4631424J17 gene, transcript variant 1 transcript_id : XM_282969.7

name	Ttc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20452461 GeneID:66827 MGI:1914077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 1 transcript_id : NM_133795.1

name	Adra1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803355 GeneID:11548 MGI:104774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 1b transcript_id : NM_007416.3

name	Il12b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892765 GeneID:16160 MGI:96540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 12b transcript_id : NM_008352.2

name	Ublcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382229 GeneID:79560 MGI:1933105
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-like domain containing CTD phosphatase 1 transcript_id : NM_024475.4

name	3732413I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801878 GeneID:74315 MGI:1921565
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3732413I11 gene transcript_id : NM_028862.2

name	Gabrb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679909 CCDS:CCDS24555.1 GeneID:14401 MGI:95620
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0007214 - gamma-aminobutyric acid signaling pathway [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid receptor beta-2 subunit; subunit beta 2 gamma-aminobutyric acid (GABA-A) receptor product : gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 protein_id : NP_032096.1

name	Atp10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125628644 GeneID:319767 MGI:2442688
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 note : potential phospholipid-transporting ATPase VB product : ATPase, Class V, type 10B protein_id : NP_795973.2

name	EG544767 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621847 GeneID:544767 MGI:3646984
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622131.1

name	Pttg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305427 CCDS:CCDS24556.1 GeneID:30939 MGI:1353578
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0045143 - homologous chromosome segregation [Evidence IDA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : pituitary tumor-transforming 1 protein_id : NP_038945.1

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27477103 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_683514.2

name	Slu7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39812173 CCDS:CCDS24557.1 GeneID:193116 MGI:2385598
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : step II splicing factor SLU7 protein_id : NP_945174.1

name	C1qtnf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037153 CCDS:CCDS24558.1 GeneID:69183 MGI:1916433
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005102 - receptor binding [Evidence IDA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0006817 - phosphate transport [Evidence IEA]; GO:0046321 - positive regulation of fatty acid oxidation [Evidence IDA]; GO:0046326 - positive regulation of glucose import [Evidence IDA]; GO:0045725 - positive regulation of glycogen biosynthesis [Evidence IDA]; GO:0051260 - protein homooligomerization [Evidence IDA] codon_start : 1 product : C1q and tumor necrosis factor related protein 2 protein_id : NP_081255.1

name	Ccnjl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865891 CCDS:CCDS24559.1 GeneID:380694 MGI:2685723
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : cyclin J-like protein_id : NP_001038995.1

name	Fabp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680441 CCDS:CCDS24560.1 GeneID:16204 MGI:96565
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ileal lipid binding protein product : fatty acid binding protein 6, ileal (gastrotropin) protein_id : NP_032401.1

name	4631424J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63621857 GeneID:70802 MGI:1918052
definition	codon_start : 1 product : hypothetical protein LOC70802 isoform 1 protein_id : XP_282969.4

name	Ttc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20452462 CCDS:CCDS24561.1 GeneID:66827 MGI:1914077
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 1 protein_id : NP_598556.1

name	Adra1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792804 CCDS:CCDS24562.1 GeneID:11548 MGI:104774
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004937 - alpha1-adrenergic receptor activity [Evidence IDA] [Evidence IMP] [Evidence IGI]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007512 - adult heart development [Evidence IGI]; GO:0048148 - behavioral response to cocaine [Evidence IMP]; GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0016049 - cell growth [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0001997 - increased strength of heart contraction by epinephrine-norepinephrine [Evidence IGI]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0045818 - negative regulation of glycogen catabolism [Evidence IMP]; GO:0035265 - organ growth [Evidence IGI]; GO:0045819 - positive regulation of glycogen catabolism [Evidence IMP]; GO:0001996 - positive regulation of heart contraction rate by epinephrine-norepinephrine [Evidence IGI]; GO:0001975 - response to amphetamine [Evidence IMP]; GO:0043278 - response to morphine [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0001987 - vasoconstriction of artery during baroreceptor response to lowering of blood pressure [Evidence IMP]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 note : alpha1B-adrenergic receptor product : adrenergic receptor, alpha 1b protein_id : NP_031442.2

name	Il12b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680397 CCDS:CCDS24563.1 GeneID:16160 MGI:96540
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0042164 - interleukin-12 alpha subunit binding [Evidence IPI]; GO:0005143 - interleukin-12 receptor binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0019735 - antimicrobial humoral response (sensu Vertebrata) [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence IDA]; GO:0042095 - interferon-gamma biosynthesis [Evidence ISS]; GO:0030101 - natural killer cell activation [Evidence ISS]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence ISS]; GO:0045078 - positive regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0042035 - regulation of cytokine biosynthesis [Evidence ISS]; GO:0042093 - T-helper cell differentiation [Evidence ISS] codon_start : 1 note : IL-12 p40; IL-23 subunit p40 product : interleukin 12b protein_id : NP_032378.1

name	Ublcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575895 CCDS:CCDS24564.1 GeneID:79560 MGI:1933105
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : ubiquitin-like domain containing CTD phosphatase 1 protein_id : NP_077795.2

name	3732413I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037357 CCDS:CCDS24565.1 GeneID:74315 MGI:1921565
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74315 protein_id : NP_083138.1

name	LOC100039392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039392
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 1 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 2 pseudo : _no_value

name	LOC620562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620562
definition	number : 3 pseudo : _no_value

clone name	MSMg01-435P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059M06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-462I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288D08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-468N19.T7 (MSMg01no468_n19.b1)	MSMg01-468N19.TJ (MSMg01no468_n19.g1)
ACC	AG552234	AG552235
length	788	909
length of high quality (start - end)	173 (86 - 258)	---
definition	CHROMAT_FILE: MSMg01no468_n19.b1 PHD_FILE: MSMg01no468_n19.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:45:14 2005	CHROMAT_FILE: MSMg01no468_n19.g1 PHD_FILE: MSMg01no468_n19.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:45:14 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAAACACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCANAAGAG ACCGCGGAATTCAGATGTGTGCCCAATGACACACGTGAACACGTGCACAC ACGCACACTGTCAGAACTTGACCCTATTAAGCAGGAGGACCATTATCCCA CTACCCCCACCTCCCATGGCTTTCCAGACCTGAGGTGGTCAGCCAGGGGC CGGATGGGCTTCTAGCTCGCAGGAAACCACTCGGCAATGAGCACTGTTTT TCCCAGGGAGGGTGTGTGTATCCTGGAAGTGGCCATGAAAGGGAACCAGA AAACTTGGGGTAAAAAAAAACCCCCCGGGGGGGNTGGATTTTTTTTTTTT TTCAAAAAAACGGCGAAAAAGGCTCTCTCGGCGAAGAATGAATATCCCCC CCCTTTTTTCTCTTTTCTTTCTCCCCCACCCTGTCGTGCGCGTGTTTTTT TATTAAGCATATTTTAACCTAATAATCTACCCTCTTTTTCCTCTTCCCCT TCTTTCTCTAGTTCTTCCCTTCCTTTTTCATCTTACTATTCGCCATTATT CATTTCCCTCTATTTATCTGTACTCTTCTTTTTCTCTCCCTTCTTCTATT TCTATCCTTTTTCTGTCTTTGCTCTCTACCTCCCTCCTTCCTTCTATCCC CTCCTCCACTCCTCGTTCGCTCCCTTATACCTCTCTCTCCCCATTCTTAT TATATCTTATCAATTCCTTCTTCTTTTCTTTGGGCCACCGCTTCATTCCT TACCTTCTATCATAACATTCTCTTCTTCCCCATCAACA	NCCAATACTNNNNNNNNNNNNNNNNNNNNCNNCGGGTTTTCAAAACATTT ANNNNNANNNNANNNNAANGTTTCCCCGAAAATTCCGNNANGNTGNTTAN NANNTGANCCTTATNANGNNNAAAGNAAAGNNAAACCTTGGNNAACCTGG NNTAANTGACTTCCCTCANNNNGAACAAAAGGNNNNNANNNNANNNAACT ATGNGCATTTGCTTCCCTACNNNNNTGCACCGTGCCACATTGTTCTGTCC CGTTTGGGGGAGGTGGGGGCGGGAGGGAGGGGGAGTGGTGAGTGGGGGTG TGAGGGGGTGGAGGGAGGGGGGGGGGGGGGGGGGGGGGGTGGTGGGGGGC GGTGGCGGGAGCGCGGGCGTGTGGGGGGGGGGGGTNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCNNNGNNGGGGGGGNNNTCTTTTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNNNNNNCNNNNNNNNNNNC NCCNCCNNNNCNNNNNNCCCCCCNNNCCCCCCCCCCCCCCCCCCCCCCNC NNNNCCCCCCCCCCCCCCCCCCCNCNNNNNNNNNNNNNNNNNNNNNCCNN NNNNCNCCCNNCNNNNNNNNNNNNNCNNCCNNNNNNNCCNNNNNNNNNNN NNNNNCNNCCCTTTTNNNNNCNNNCCCCCCCNCNNCCNCCNNNNNNNNNN NNNNNCCCCCNNNNNNCNCCCCCCCCCCNCNNNNNNNNNNNNCCCCCCCC NNNCNNNCNNCNNNNNNNNNCNNCCNCCTCCTTTTTTTTCTTTTTTTGTT CGTTTTTTG
quality values	Open. Hide. 0 3 7 7 6 6 9 12 12 12 9 9 12 10 14 25 37 30 30 17 21 12 23 15 15 13 10 12 11 27 27 25 21 9 15 14 13 8 8 6 6 6 8 3 0 3 8 8 8 8 8 8 11 9 22 22 31 28 28 21 23 23 25 25 24 28 20 20 11 14 12 7 7 6 6 6 6 6 6 6 6 12 17 17 10 21 19 30 29 31 47 47 47 38 42 42 42 43 50 50 36 36 36 32 32 31 37 37 37 30 30 22 25 25 26 30 37 37 37 37 42 50 39 27 18 10 10 10 10 12 24 13 17 17 26 30 37 37 37 37 37 41 48 53 59 59 53 53 50 50 57 57 59 59 59 57 57 57 57 50 53 57 54 54 54 54 54 68 68 68 68 59 46 48 48 48 48 48 54 54 54 54 46 46 48 44 59 57 57 57 59 57 57 57 57 57 57 48 48 48 48 43 43 43 43 43 47 57 57 59 59 59 59 57 48 48 59 48 48 47 46 46 41 39 39 39 37 37 39 43 41 47 41 32 32 20 20 24 41 41 46 41 39 34 30 9 9 9 12 12 15 28 37 39 27 28 22 19 16 12 11 11 11 11 13 11 11 11 12 12 22 17 20 26 17 11 9 9 8 8 8 9 14 14 14 14 15 16 11 8 7 7 9 8 8 9 9 11 11 11 17 12 9 8 8 6 6 6 6 10 10 12 12 9 9 9 9 10 11 12 10 10 10 10 10 8 12 19 18 17 13 12 3 0 3 6 8 8 10 10 11 19 27 29 31 12 12 11 10 8 11 8 8 8 8 8 19 10 11 13 12 10 10 10 10 10 10 15 15 9 8 8 8 8 11 11 8 8 8 8 8 8 8 8 8 6 8 10 8 6 6 8 8 8 8 8 8 8 10 8 13 11 11 11 11 11 11 11 10 10 11 21 22 24 32 16 16 12 9 8 8 10 13 10 11 8 8 8 8 8 11 11 11 12 12 8 8 6 6 8 8 10 10 10 10 11 11 10 8 10 8 8 8 8 8 8 8 8 8 8 10 10 10 8 9 9 11 9 10 9 8 8 8 8 8 8 8 8 8 8 8 10 9 11 10 9 10 13 10 10 10 11 11 10 10 10 10 12 9 8 8 6 6 8 8 10 11 11 10 9 9 9 9 9 10 9 8 8 8 8 8 10 10 15 11 12 16 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 10 8 8 10 9 9 9 10 13 8 8 8 10 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 15 11 16 16 11 10 8 8 8 8 10 9 9 9 10 10 8 8 8 11 11 12 13 10 10 8 8 8 8 8 8 8 8 10 10 10 10 10 6 6 6 6 8 8 8 7 7 8 8 8 8 8 8 12 12 10 10 15 10 11 8 10 8 8 8 15 12 10 8 6 6 8 12 10 10 15 10 10 10 12 18 20 22 16 12 10 8 6 6 6 6 8 8 8 12 18 22 10 8 8 8 8 8 8 8 10 8 8 12 8 8 8 8 11 10 8 8 8 10 8 8 8 8 10 8 8 8 8 8 10 8 8 7 7 10 8 8 8 10 8 8 8 10 10 11 11 11 9 13 9 9 8 15 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 9 9 9 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 9 8 8 8 8 6 6 8 6 6	Open. Hide. 0 3 7 7 7 8 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 7 7 7 7 7 7 6 7 7 9 9 9 9 9 13 12 10 3 0 0 0 0 0 3 0 0 0 0 3 0 0 0 0 3 3 0 3 3 7 6 6 7 8 8 6 6 6 7 7 11 12 15 17 3 0 0 3 0 3 0 3 3 0 3 8 3 0 0 3 0 0 3 17 3 0 3 8 8 17 23 3 0 3 0 3 0 0 0 3 17 17 3 0 3 7 7 3 0 0 3 7 7 9 9 9 7 7 3 0 0 3 6 6 9 7 7 3 0 0 3 17 3 0 3 17 19 44 24 17 17 12 12 17 19 3 0 0 0 0 3 8 8 8 8 8 8 6 6 3 0 0 0 0 0 3 0 0 0 0 3 0 0 0 3 13 11 19 19 18 3 0 3 17 11 12 12 12 17 10 10 15 11 14 14 13 8 3 0 0 0 0 0 3 14 8 7 7 8 21 11 10 10 9 10 10 8 8 8 6 6 6 6 6 6 6 6 6 6 6 6 7 7 6 6 9 8 9 8 8 8 11 14 16 15 7 6 6 6 6 6 6 6 8 7 7 7 8 8 9 6 6 6 6 8 8 8 8 8 7 7 7 15 10 10 9 9 9 9 10 10 10 14 13 13 15 15 8 8 8 8 9 6 6 6 7 6 7 7 8 8 8 9 7 7 8 10 10 8 8 12 20 24 24 24 24 19 17 13 10 10 10 13 10 7 7 6 6 6 10 12 9 9 9 9 10 9 9 9 6 6 6 6 7 6 12 12 11 11 13 8 11 10 11 11 11 10 10 9 10 11 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 0 0 3 8 7 10 13 15 3 0 0 0 3 6 6 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 3 0 3 3 0 3 3 0 0 0 0 3 0 0 0 0 0 0 3 13 18 19 12 3 0 0 0 3 23 23 27 18 12 12 11 12 9 9 9 9 9 9 9 9 9 13 21 18 3 0 3 0 0 0 0 3 7 7 8 8 8 6 8 10 8 8 8 30 30 22 19 16 27 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 3 0 3 7 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 3 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 6 7 7 7 7 3 0 0 0 0 0 3 0 0 0 3 18 23 32 18 21 3 0 3 0 0 3 3 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 8 3 0 0 0 0 0 0 3 0 3 7 7 7 6 6 8 7 13 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3 8 8 24 9 7 7 3 0 0 0 3 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 3 0 0 3 3 0 3 9 9 8 6 7 9 9 16 11 10 10 6 6 7 8 9 10 9 8 8 8 8 8 9 9 9 15 15 22 17 14 14

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no468_n19.b1 MSMg01no468_n19.b1 CHROMAT_FILE:
MSMg01no468_n19.b1 PHD_FILE: MSMg01no468_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:14 2005
         (173 letters)



>mm_chr11_43376430_43377001
          Length = 572

 Score =  296 bits (153), Expect = 5e-85
 Identities = 169/175 (96%), Gaps = 5/175 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaacacgtgcacacacgcacactgtcagaacttgaccctatta-a-gcaggaggaccat 58
           |||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||
Sbjct: 372 tgaacacgtgcacacacgcacactgtcagaacttgacccta--acaggcaggaggaccat 315

                                                                       
Query: 59  tatcccactacccccacctcccatggctttccagacctgaggtggtcagccaggggccgg 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tatcccactacccccacctcccatggctttccagacctgaggtggtcagccaggggccgg 255

                                                                  
Query: 119 atgggcttctagctcgcaggaaaccactcggcaatgagcactgtttttcccaggg 173
           |||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 254 atggacttctagctcgcaggaaaccactcggcaatgagcactg-ttttcccaggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 572
Length adjustment: 8
Effective length of query: 165
Effective length of database: 564
Effective search space:    93060
Effective search space used:    93060
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information