Query= MSMg01no469_f19.b1 MSMg01no469_f19.b1 CHROMAT_FILE:
MSMg01no469_f19.b1 PHD_FILE: MSMg01no469_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:55 2005
(465 letters)
>mm_chr11_117257932_117258796
Length = 865
Score = 833 bits (431), Expect = 0.0
Identities = 453/465 (97%), Gaps = 8/465 (1%)
Strand = Plus / Plus
Query: 1 tcagcagctgtctcagggctgtgagactcattgagacatcagaccccagtgctcaatgta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 209 tcagcagctgtctcagggctgtgagactcattgagacatcagaccccagtgctcaacgta 268
Query: 61 gaggtaaagtggaacatatacccaagttacagcccccagaaggaaggcagatgctcacca 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gagg--------aacatatacccaagttacagcccccagaaggaaggcagatgctcacca 320
Query: 121 taaaagacttgaagcccatggctcaggcacagtaaaccgacatcctgttggggaaggcct 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 taaaagacttgaagcccatggctcaggcacagtaaaccgacaccctgttggggaaggcct 380
Query: 181 tgggtagccctcctgtaccctaggggcctggacccagcagcctctctgaggacagcctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtagccctcctgtaccctaggggcctggacccagcagcctctctgaggacagcctac 440
Query: 241 tgtggcactcttctgcatgcagtggtctctttctgtggtagaggaagcatttcacttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggcactcttctgcatgcagtggtctctttctgtggtagaggaagcatttcacttcct 500
Query: 301 ccctaggatttagtgcctttggtggctttatatttacaactggggacaaactagggccag 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctaggatttagtgcctttggtggctttatatttacaactggggacaaactagggccag 560
Query: 361 agtgcacgcccctccccctgcgcttactcacagtccagggggacctggaaatctcactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgcacgcccctccccctgcgcttactcacagtccagggggacctggaaatctcactga 620
Query: 421 gaagtggaaggacagtggtggcttttattagagagcttgcccctc 465
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 gaagtggaaggacagtagtggcttttattagagagcttgcccctc 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_f19.g1 MSMg01no469_f19.g1 CHROMAT_FILE:
MSMg01no469_f19.g1 PHD_FILE: MSMg01no469_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:55 2005
(421 letters)
>mm_chr11_117418658_117419478
Length = 821
Score = 748 bits (387), Expect = 0.0
Identities = 415/429 (96%), Gaps = 8/429 (1%)
Strand = Plus / Minus
Query: 1 atgatgatcccagctggctggcttgagggttcaggtttcttcaagaaggagggcttcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 atgatgatcccagctggctggcttgagggttcaggtttcttcaagaaggagggcttcact 735
Query: 61 tgtggagagaggaagtgtgaccaacaggaccctcacagctatggagatgtcagggcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 734 tgtggagagaggaagtgtgaccaacaggaccctcacagctatggagatgacagggcagat 675
Query: 121 tttctaatcagaaccttggctatgtgtcacgggagctgcaggcca--------gggtcag 172
||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 674 tttctaatcagaaccttggctatgtgtcacgggagttgcaggccaggaatcctgggtcag 615
Query: 173 ggtatctggggatggtcctacctctgaagtctgggggtttctttctccttttggttctcg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggtatctggggatggtcctacctctgaagtctgggggtttctttctccttttggttctcg 555
Query: 233 gatgtcccattttgtccctactggtcctgctcccaagccttcagagtaggaggctaatga 292
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 554 gatgtcccatccagtccctactggtcctgctcccgagccttcagagtaggaggctaatga 495
Query: 293 agagctgagggccgatggccaggaccccaccccaggagtccgcctggccaatcgaatcag 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agagctgagggccgatggccaggaccccaccccaggagtccgcctggccaatcgaatcag 435
Query: 353 aagggttaaagaacaagtcacgagtctccagaggccactgttcccatttcaatctttcct 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagggttaaagaacaagtcacgagtctccagaggccactgttcccatttcaatctttcct 375
Query: 413 ttttggctt 421
|||||||||
Sbjct: 374 ttttggctt 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
