Query= MSMg01no469_k09.b1 MSMg01no469_k09.b1 CHROMAT_FILE:
MSMg01no469_k09.b1 PHD_FILE: MSMg01no469_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:18 2005
(462 letters)
>mm_chr11_30002035_30002895
Length = 861
Score = 847 bits (438), Expect = 0.0
Identities = 456/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 aaaaaaggtgagtactcttgaaattctagcttctgactttgtgtcttccacatctgcaat 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aaaaaaggtgagtactcttgaaattctagcttctgagtttgtgtcttccacatctgcaat 260
Query: 61 ttctagagttacccaactgacaataaaaaaaaaagacctctagatttttcttatggaaat 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ttctagagttacccaactgacaataaaaaaaaa-gacctctagatttttcttatggaaat 319
Query: 121 gaaagcagtcacacccaggaggccatcagtgtggcactgtgatgtctggtactatgggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaagcagtcacacccaggaggccatcagtgtggcactgtgatgtctggtactatgggtg 379
Query: 181 cagcagtaggaactgactctgaagtccatggagggggtgctaagatggaacagttaagag 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagcagtaggaactgactctgaggtccatggagggggtgctaagatggaacagttaagag 439
Query: 241 gtcaagttatctgggactctcatgacaagatgtattttgaaaataaatgtatgtatgcac 300
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 440 gtcaagttatctgggactctcatgacaaaatgtattttgaaaatatatgtatgtatgcac 499
Query: 301 actcgcgaatgtcaaaaagacaacctgcaagagagcctttcctttcctcctttccaccac 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actcgtgaatgtcaaaaagacaacctgcaagagagcctttcctttcctcctttccaccac 559
Query: 361 gtgggttctgagaaggaaagctgtataatcaggcttggcagcaggaactgttgccactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgggttctgagaaggaaagctgtataatcaggcttggcagcaggaactgttgccactga 619
Query: 421 gcacattctcacccccttgccttatctttttacactttgaga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcacattctcacccccttgccttatctttttacactttgaga 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 861
Length adjustment: 10
Effective length of query: 452
Effective length of database: 851
Effective search space: 384652
Effective search space used: 384652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_k09.g1 MSMg01no469_k09.g1 CHROMAT_FILE:
MSMg01no469_k09.g1 PHD_FILE: MSMg01no469_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:18 2005
(242 letters)
>mm_chr11_30180559_30181200
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Minus
Query: 1 ttcaaatgcctgcgctcatagggagggtgttgctagggttacaattcggttttaaatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttcaaatgcctgcgctcatagggagggtgttgctagggttacaattcggttttaaatgtc 383
Query: 61 cttcaacccacattcaaacacagaatttctatctacttctatgacttaagaaaccacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cttcaacccacattcaaacacagaatttctatctacttctatgacttaagaaaccacaga 323
Query: 121 actgcacagaactgcaattctcatattttctgagatgggagcccttttgcttgaggaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgcacagaactgcaattctcatattttctgagatgggagcccttttgcttgaggaaca 263
Query: 181 ttcccaagttttatatagattagagagtgtgttacaaaaaggagatatttatatcagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttcccaagttttatatagattagagagtgtgttacaaaaaggagatatttatatcagttg 203
Query: 241 tt 242
||
Sbjct: 202 tt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
