Query= MSMg01no469_p21.b1 MSMg01no469_p21.b1 CHROMAT_FILE:
MSMg01no469_p21.b1 PHD_FILE: MSMg01no469_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:45 2005
(251 letters)
>mm_chr11_72343610_72344260
Length = 651
Score = 455 bits (235), Expect = e-132
Identities = 247/251 (98%)
Strand = Plus / Minus
Query: 1 agctactgcagagtgttccagatgcaggaatgaaagtatgcacagggttaggcgcagggg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 451 agctactgcagagtgttccagatgcaggaatgaaagtatgcacaggggtaggggcagggg 392
Query: 61 aagaaaagagcagagctggggcctgaggactaggaggctgggcccagatctctgggtgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aagaaaagagcagagctggggcctgaggactaggaggctgggcccagatctctgggtgtc 332
Query: 121 tgagagcagtgagaggatttggtcagagagtagtaaggaacacagtccaccgtgtcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgagagcagtgagaggatttggtcagagagtagtaaggaacacagtccaccgtgtcttaa 272
Query: 181 gaatcactttctgagggcctgtgtagagagagtctctgtcagagccggacagtgctgaag 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gaagcactttctgagggcctgtgtagagagagtctctgtcagagccggacagtgctgaag 212
Query: 241 cgggtacaaga 251
||||||||||
Sbjct: 211 tgggtacaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no469_p21.g1 MSMg01no469_p21.g1 CHROMAT_FILE:
MSMg01no469_p21.g1 PHD_FILE: MSMg01no469_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:45 2005
(445 letters)
>mm_chr11_72177865_72178709
Length = 845
Score = 806 bits (417), Expect = 0.0
Identities = 438/449 (97%), Gaps = 8/449 (1%)
Strand = Plus / Plus
Query: 1 ttcccaaatagtcttgtcattcaaaggggaaaataagaaatcagaatggctgtctttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccaaatagtcttgtcattcaaaggggaaaataagaaatcagaatggctgtctttgta 260
Query: 61 accaaacgctaggacagctgagccgattccaagtgtccactagagtctatgatgacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaaacgctaggacagctgagccgattccaagtgtccactagagtctatgatgacaatg 320
Query: 121 tgaaacacttgtttcccaagtacttggctgagtatttctcaactctcagttcttcataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaacacttgtttcccaagtacttggctgagtatttctcaactctcagttcttcataca 380
Query: 181 tttcataatttgagtcagaagtgttggaaagtgaagggggccttttcaaatttgctcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcataatttgagtcagaagtgttggaaagtgaagggggccttttcaaatttgctcaat 440
Query: 241 agaccagtatta----ttttttatcactagcccttcgaagagaggtgatttacctttgac 296
|||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaccagtattagacctg----accactagcccttcgaagagaggtgatttacctttgac 496
Query: 297 tcgaagagtactcgtggttagtgatcattcctatttgagctttatttctggaaaatcttg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcgaagagtactcgtggttagtgatcattcctatttgagctttatttctggaaaatcttg 556
Query: 357 aacaggagacttcgaggtgacatcagcctgaagcagcagcagacagatctgggaccggac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aacaggagacttcgaggtgacatcagcctgaagcagcagcagacagatctgggaccggac 616
Query: 417 cgtgcacagtgaaggttactagtgacttg 445
|||||||||||||||||||||| ||||||
Sbjct: 617 cgtgcacagtgaaggttactagcgacttg 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
