Query= MSMg01no471_j21.b1 MSMg01no471_j21.b1 CHROMAT_FILE:
MSMg01no471_j21.b1 PHD_FILE: MSMg01no471_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:55 2005
(419 letters)
>mm_chr11_91996639_91997457
Length = 819
Score = 795 bits (411), Expect = 0.0
Identities = 417/419 (99%)
Strand = Plus / Plus
Query: 1 ctttggagaattgattatttgattctctctacttacactgatgatgtgcaaagcaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttggagaattgattatttgattctctctacttacactgatgatgtgcaaagcaaacaa 260
Query: 61 aattatttcaaacaagcagagagttgtgctaatagttaagcgcctcaggatttattctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattatttcaaacaagcagagagttgtgctaatagttaagcgcctcaggatttattctat 320
Query: 121 tgtcctgaaaaacttcaatattgaaactccatggtcaagctctctttatttttaatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcctgaaaaacttcaatattgaaactccatggtcaagctctctttatttttaatcttg 380
Query: 181 aaagcatttaaaaactcatgcaggctgaacaatatacacaataggctccgtgacaattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagcatttaaaaactcatgcaggctgaacaatatacacaataggctccgtgacaattgt 440
Query: 241 cctgtcatgtgtagtcttattacttgatatattgcaaaggggattggatgcccaggccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgtcatgtgtagtcttattacttgatatattgcaaaggggattggatgcccaggccta 500
Query: 301 aaaagcctctattactaagttttggttgcttagttatttttcagtactgatccctttgga 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaagcctctattactaaggtttggttgcttagttatttttcagtactgatccctttgga 560
Query: 361 tcaaatttacataagaatgcagtggttttggtctgcctttgctaattgagtcttcattg 419
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaaatttacataagaatgtagtggttttggtctgcctttgctaattgagtcttcattg 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_j21.g1 MSMg01no471_j21.g1 CHROMAT_FILE:
MSMg01no471_j21.g1 PHD_FILE: MSMg01no471_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:55 2005
(523 letters)
>mm_chr11_92216625_92217547
Length = 923
Score = 942 bits (487), Expect = 0.0
Identities = 515/526 (97%), Gaps = 4/526 (0%)
Strand = Plus / Minus
Query: 1 cttcagtgagaggtttgaactccataattgcagatctgaagttgtgagtgttgttggttc 60
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttcagtgagagcttggaactccataattgcagatctgaagttgtgagtgttgttggttc 525
Query: 61 atttttggactgatatctgtttacatgtcacaaccggatggtaaggtatgagcttatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 atttttggactgatatctgtttacatgtcacaaccggatggtaaggtatgagcttatatg 465
Query: 121 ccaaaagcaatatttctgtatcaagaatccattcaaagactatgtgaaattgggcagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccaaaagcaatatttctgtatcaagaatccattcaaagactatgtgaaattgggcagaat 405
Query: 181 aatttcccaagtgaactaaaatattaaaacagaacttttgatcatatacatagcctttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatttcccaagtgaactaaaatattaaaacagaacttttgatcatatacatagcctttaa 345
Query: 241 cacttattctttcccaacataaaatatgcagttttatcatctcaaaaagtgtgcctaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cacttattctttcccaacataaaatatgcagttttatcatctcaaaaagtgtgcctaatt 285
Query: 301 ttttagcagtgttcattgaaaactgtctgctcaaggtcagatatataataaaattgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttttagcagtgttcattgaaaactgtctgctcaaggtcagatatataataaaattgaaaa 225
Query: 361 cctcatttgaggatgactatctttgctaagtattggtgg---cacacacctttaatccca 417
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 224 cctcatttgaggatgcctttctttgctaagtattggtggtggcacacacctttaatccca 165
Query: 418 ngcgtttgggaggcagaancaggcaaatttctaaattcaaggccagcctggtttatagag 477
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 164 -gcgtttgggaggcagaagcaggcaaatttctgaattcaaggccagcctggtttatagag 106
Query: 478 taagttccagcatggccagggtcacacagggaaaccctgtctttaa 523
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 105 taagttccagcatggccagggtcacacagagaaaccctgtctttaa 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
