Query= MSMg01no472_i13.b1 MSMg01no472_i13.b1 CHROMAT_FILE:
MSMg01no472_i13.b1 PHD_FILE: MSMg01no472_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:12 2005
(282 letters)
>mm_chr11_8406322_8407003
Length = 682
Score = 518 bits (268), Expect = e-151
Identities = 277/280 (98%)
Strand = Plus / Minus
Query: 1 acaggaaggcttagaggtaatcaccagtgacagtgagagggttctgagagtcaacatggt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 480 acaggaaggcttagaggtaatcaccaatgacagtgagagggttctgagagtcaacatggt 421
Query: 61 gtgcagtgatgctgtaaaccctcaatgtagagcctcctgtgatcttagaggtgtgcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 420 gtgcagtgatgctgtaaaccctcaatgtagagcctcctgtgatcttagaggtgtgcatat 361
Query: 121 gagctgagggagatagcagagcctctgggtctggatgggtaagaaaggaacccaggggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagctgagggagatagcagagcctctgggtctggatgggtaagaaaggaacccaggggtt 301
Query: 181 catgctacccttggtatgaatgtggtgctggacttaactcttcattggctctctctgctg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 catgctactcttggtatgaatgtggtgctggacttaactcttcattggctctctctgctg 241
Query: 241 tgctaaggcgtgaacctgatgtatgtagatgtgtacatgg 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgctaaggcgtgaacctgatgtatgtagatgtgtacatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_i13.g1 MSMg01no472_i13.g1 CHROMAT_FILE:
MSMg01no472_i13.g1 PHD_FILE: MSMg01no472_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:12 2005
(464 letters)
>mm_chr11_8214559_8215422
Length = 864
Score = 866 bits (448), Expect = 0.0
Identities = 460/464 (99%)
Strand = Plus / Plus
Query: 1 tcaaaaggacatccatgatctaaaggggaagttactcctcaaaaagcacataatgatgct 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaaggacatccatgatctaaagaggaagttactcctcaaaaagcacataatgatgct 260
Query: 61 attatttgaaaagtagcctggaaatattatttctaaaatataataatatagttaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attatttgaaaagtagcctggaaatattatttctaaaatataataatatagttaaattat 320
Query: 121 tatagcccatctcagggctgtagaggtgactcagtgattaagagcagttgttgcttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatagcccatctcagggctgtagaggtgactcagtgattaagagcagttgttgcttttca 380
Query: 181 cttgcagaggacctgggatcggtttatagaatccatataatgcttaagtccaattccaca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 cttgcagaggacctgggatcggtttatagaatccatataatgcttaagtccagttccaca 440
Query: 241 ggattcattgccctcttcttttctcaacaggcaccaagtgcacacatgtggtacgcagat 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatccaatgccctcttcttttctcaacaggcaccaagtgcacacatgtggtacgcagat 500
Query: 301 gaagatatttacaaaacacagataacataaaacaaatagatgtaataaagatgaaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagatatttacaaaacacagataacataaaacaaatagatgtaataaagatgaaataaa 560
Query: 361 ttaattgtaaatcacatatgaacattgttgacaatcaggcatatccatggacagctataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaattgtaaatcacatatgaacattgttgacaatcaggcatatccatggacagctataa 620
Query: 421 ctgacttcatgacgaccaggcatctctacaccagctttcaggga 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgacttcatgacgaccaggcatctctacaccagctttcaggga 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
