Query= MSMg01no472_j24.b1 MSMg01no472_j24.b1 CHROMAT_FILE:
MSMg01no472_j24.b1 PHD_FILE: MSMg01no472_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:19 2005
(239 letters)
>mm_chr11_86549476_86550114
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 aaaggctgagatatagcccagtaccaaccctctgcccactggcctagcatgtgtgcagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaaggctgagatatagcccagtaccaaccctctgcccacttgcctagcatgtgtgcagca 260
Query: 61 ttggatccaatccctaattaaagcacaaaggaaaaggaggcagttttaaatgctacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatccaatccctaattaaagcacaaaggaaaaggaggcagttttaaatgctacttca 320
Query: 121 aaggtctagcagtttgcacctagacttcttagtcttagtaacttctagttttctattgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtctagcagtttgcacctagacttcttagtcttagtaacttctagttttctattgta 380
Query: 181 ccttcattctaaagttcaaaggaaaagaagataggttctcagataaaatgagattgttt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttcattctaaagttcaaaggaaaagaagataggttctcagataaaatgagattgttt 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_j24.g1 MSMg01no472_j24.g1 CHROMAT_FILE:
MSMg01no472_j24.g1 PHD_FILE: MSMg01no472_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:19 2005
(245 letters)
>mm_chr11_86800184_86800830
Length = 647
Score = 437 bits (226), Expect = e-127
Identities = 243/250 (97%), Gaps = 5/250 (2%)
Strand = Plus / Minus
Query: 1 ttttagaacatagtgccagaaaaagctttggcccttcagaggaactggtatgcctttttt 60
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 405 ttttagaacatagtgccaggaaaagctttggcccttcagagggactggtatgcctttttt 346
Query: 61 tttctttctttttttgggacaattggaaatttataactgctcatatttctctttttgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttctttctttttttgggacaattggaaatttataactgctcatatttctctttttgcta 286
Query: 121 tggttgcc-aggaagtacagagccaaaactgtggcttgctccacagaggtctgcatccta 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tggttgccaaggaagtacagagccaaaactgtggcttgctccacagaggtctgcatccta 226
Query: 180 a-ttttttcccagtgttaaccttattttttgttttttgtttttgtttgt---tttttttt 235
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 225 atttttttcccagtgttaaccttattttttgttttttgtttttgtttgtttgtttttttt 166
Query: 236 tgtttcatat 245
||||||||||
Sbjct: 165 tgtttcatat 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 647
Length adjustment: 9
Effective length of query: 236
Effective length of database: 638
Effective search space: 150568
Effective search space used: 150568
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
