Query= MSMg01no474_d16.b1 MSMg01no474_d16.b1 CHROMAT_FILE:
MSMg01no474_d16.b1 PHD_FILE: MSMg01no474_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:36 2005
(496 letters)
>mm_chr11_66553183_66554078
Length = 896
Score = 944 bits (488), Expect = 0.0
Identities = 494/496 (99%)
Strand = Plus / Minus
Query: 1 caaaactcacagcatgaataaccgcagtgaacacatgctatttgtggctcttttctcccc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 696 caaaactcacagcatgaataacagcagtgaacacatgctatttgtggctcttttctcccc 637
Query: 61 atcaggaaagccaaagccatttacgcaagcattcagttaaggacattgtacctctttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atcaggaaagccaaagccatttacgcaagcattcagttaaggacattgtacctctttgta 577
Query: 121 agcacaatagagtccgagtttcattcattttcatctctgctgtctctctgttttgctata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agcacaatagagtccgagtttcattcattttcatctctgctgtctctctgttttgctata 517
Query: 181 atgtgctttggtcttttagaatgtccctctcttgcttatattacatacattcatacttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgtgctttggtcttttagaatgtccctctcttgcttatattacatacattcatacttca 457
Query: 241 ggctttctgtggtcttaggaagtacttatgcccaatatcccccattctttacttttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggctttctgtggtcttaggaagtacttatgcccaatatcccccattctttacttttgttt 397
Query: 301 ttccatcttctgtatcaatgtaccaccgtaagtgctttcacgtgtcagctttttaaccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttccatcttctgtatcaatgtaccaccgtaagtgctttcacgtgtcagctttttaaccac 337
Query: 361 agcttcctttttctgccctgtcttctctttactcctgtcattccttaacttgatccagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agcttcctttttctgccctgtcttctctttactcctgtcattccttaacttgatccagaa 277
Query: 421 ctccgacagcattttcctgtagtgcgtgttctcctctctaacctctgtgattcctaaaag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 276 ctccgacagcattttcctgtagtgcgtgttctcctctctaacctctgtgattcctacaag 217
Query: 481 agcttcctcccttggt 496
||||||||||||||||
Sbjct: 216 agcttcctcccttggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_d16.g1 MSMg01no474_d16.g1 CHROMAT_FILE:
MSMg01no474_d16.g1 PHD_FILE: MSMg01no474_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:36 2005
(293 letters)
>mm_chr11_66378608_66379301
Length = 694
Score = 458 bits (237), Expect = e-133
Identities = 274/299 (91%), Gaps = 25/299 (8%)
Strand = Plus / Plus
Query: 1 aacaa--aaacaaaaacaaaaaa---gtgaacattcttcccttttactagtccagcacac 55
||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 215 aacaaacaaacaaaaa-aaaaaaccggtgaacattcttcccttttactagtccag----c 269
Query: 56 acacacacacacacacacacacacacacacacacacacatcacacacacatattctacag 115
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 270 acacacacacacacacacacacaca--------------tcacacacacatattctacag 315
Query: 116 ttagtgtttgagaatcttgtgagtgcttatctcttgtccaagcctaaaaaa-tctcagac 174
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 316 ttagtgtttgagaatcttgtgagtgcttatctcttgtccaagcctaaaaaaatctcagac 375
Query: 175 tgctcagttggtccttgcttttatcatgggtggatttatggaagctcaggactccaagta 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgctcagttggtccttgcttttatcatgggtggatttatggaagctcaggactccaagta 435
Query: 235 ggagggctgttgagaagaaagtggaaagagcattgctcttatgagcttcagaagctaca 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggagggctgttgagaagaaagtggaaagagcattgctcttatgagcttcagaagctaca 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
