Query= MSMg01no474_f03.b1 MSMg01no474_f03.b1 CHROMAT_FILE:
MSMg01no474_f03.b1 PHD_FILE: MSMg01no474_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:44 2005
(119 letters)
>mm_chr11_77104867_77105386
Length = 520
Score = 205 bits (106), Expect = 7e-58
Identities = 112/114 (98%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatagatgatagaaag-accaaagcagtccaactctgctgtgactgcactaggt 63
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcaatagatgatagaaagtaccaaagcagtccaactctgctgtggctgcactaggt 264
Query: 64 acatttgcttgaggaagtgccctggcctgcacgagctgggactggaagttccat 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acatttgcttgaggaagtgccctggcctgcacgagctgggactggaagttccat 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 520
Length adjustment: 8
Effective length of query: 111
Effective length of database: 512
Effective search space: 56832
Effective search space used: 56832
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_f03.g1 MSMg01no474_f03.g1 CHROMAT_FILE:
MSMg01no474_f03.g1 PHD_FILE: MSMg01no474_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:44 2005
(497 letters)
>mm_chr11_77154013_77154909
Length = 897
Score = 930 bits (481), Expect = 0.0
Identities = 493/497 (99%)
Strand = Plus / Minus
Query: 1 caacacgcaggagaaggttctttccctctacctgcggatcctagggtttgagctcaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 caacacgcaggagaaggttctttccctctacctgcggatcctagggtttgagctcaggct 728
Query: 61 gtcagtcttggcaacacatgcctttacctattgagccatttttctggcctggccttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gtcagtcttggcaacacatgcctttacctattgagccatttttctggcctggccttgttt 668
Query: 121 gtttttaaagggagggtctctttgtgtgggctggtctagtcttaaattcagcattttcct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 gtttttaaagggagggtctctttgtgtaggctggtctagtcttaaattcagcattttcct 608
Query: 181 gtctcaacctcctgagcctgtgtcaccatacccagctaatttggtggtttttgttctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtctcaacctcctgagcctgtgtcaccatacccagctaatttggtggtttttgttctctc 548
Query: 241 ctgtcttcaagccttactattttcagtgttcaaactgtttcctatcgaagaccactttta 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 547 ctatcttcaagccttactattttcagtgttcaaactgtttcctatcgaagaccactttca 488
Query: 301 tctagatcaagttattcacgtataatatatatttgaggcctacttcatctcttagttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctagatcaagttattcacgtataatatatatttgaggcctacttcatctcttagttctc 428
Query: 361 gaacacttataaaccctcactggattcttactcttgttttggaagagtgtttcctgtact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaacacttataaaccctcactggattcttactcttgttttggaagagtgtttcctgtact 368
Query: 421 tcagaataaccttaaactttctatgtggctgaagatgaccttgaacttctgatattcctg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 367 tcagaataaccttaaactttctatgtggctgaagttgaccttgaacttctgatattcctg 308
Query: 481 tctctacctcttaagtg 497
|||||||||||||||||
Sbjct: 307 tctctacctcttaagtg 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
