Query= MSMg01no474_f16.b1 MSMg01no474_f16.b1 CHROMAT_FILE:
MSMg01no474_f16.b1 PHD_FILE: MSMg01no474_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:47 2005
(267 letters)
>mm_chr11_108795546_108796216
Length = 671
Score = 474 bits (245), Expect = e-138
Identities = 260/267 (97%), Gaps = 4/267 (1%)
Strand = Plus / Plus
Query: 5 gaattcattgtgtacccagagatgtccatgaatatctgatccatctgcccccgtctccta 64
|||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcattgtgtagccagagatgcccatgaatatctgatccatctgcccccatctccta 264
Query: 65 agtgcctggcgttatagttaggtgctggaattcacacccagggacttgactagctgcaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtgcctggcgttatagttaggtgctggaattcacacccagggacttgactagctgcaat 324
Query: 125 gctgggcagtaaccctcaatctcatataaacataactgcttcctgcttcacttacagcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctgggcagtaaccctcaatctcatataaacataactgcttcctgcttcacttacagcac 384
Query: 185 ttgtggaccgacttaaatatggggaaactactttgagaccctgaagagttgccgggcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtggaccgacttaaatatggggaaactactttgagaccctgaagagttgccgggcaca 444
Query: 245 gac----tctagggagcatgggtccaa 267
||| ||||||||||||||||||||
Sbjct: 445 gacagattctagggagcatgggtccaa 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 671
Length adjustment: 9
Effective length of query: 258
Effective length of database: 662
Effective search space: 170796
Effective search space used: 170796
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_f16.g1 MSMg01no474_f16.g1 CHROMAT_FILE:
MSMg01no474_f16.g1 PHD_FILE: MSMg01no474_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:47 2005
(194 letters)
>mm_chr11_108968256_108968846
Length = 591
Score = 321 bits (166), Expect = 2e-92
Identities = 183/190 (96%), Gaps = 3/190 (1%)
Strand = Plus / Minus
Query: 4 aaaaaacaaaaaggaaaaaagaaaaagaaaaaagaaaaaacaacccatagaatacccaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 430 aaaaaacaaaaaggaaaaaagaaaaagaaaaaagaaaaaacaacccatagactagccaga 371
Query: 64 agaaaaaaaaaaaacaccatttgctaccatctgatagctcttctgcaaaggctgcacgcc 123
|| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 370 ag---aaaaaaaaacaccatttgctaccatctgatagctcttccgcaaaggctgcatgcc 314
Query: 124 attgctttgaaagtctgcatttaacaatactggggaccccacatctgtgtatctcaggcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attgctttgaaagtctgcatttaacaatactggggaccccacatctgtgtatctcaggcc 254
Query: 184 tgacgcatct 193
||||||||||
Sbjct: 253 tgacgcatct 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 591
Length adjustment: 8
Effective length of query: 186
Effective length of database: 583
Effective search space: 108438
Effective search space used: 108438
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
