Query= MSMg01no475_c16.b1 MSMg01no475_c16.b1 CHROMAT_FILE:
MSMg01no475_c16.b1 PHD_FILE: MSMg01no475_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(551 letters)
>mm_chr11_23809246_23810196
Length = 951
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%)
Strand = Plus / Minus
Query: 119 ttgtgattataaaatctcctgagaaaggaaatcactcattccagagggttccactggaaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ttgtgattataaaatctcctgagaaaggaaatcactcattccagagggttccactggaaa 892
Query: 179 attcaaccacatgtttaaggaattaacactaaatatactcaaactattctacaacataaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 attcaaccacatgtttaaggaattaacactaaatatactcaaactattctacaacataaa 832
Query: 239 gcaagatggaataatccccaacttgcttcacgagggtaagatttctctgatacaaaaaca 298
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 831 gcaagatggaataatccccaacttgcttcatgagggtaagatttctctgatacaaaaaca 772
Query: 299 aagacaacgaaaagagaaaatagtagatgagtggagtatttcaacacaaaacttccccga 358
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 771 aagacaacgaaaagagaaaatagtagatgagtggattatttcaacacaaaacttccccca 712
Query: 359 aaggagctggagctatggccccgggggctgaagtaccagcagtccttccccggggacctg 418
|||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 711 aaggggctggagctatggccctgggggctgaagtaccagcagtcctcccccggggacctg 652
Query: 419 gctaatttgctccagttttatatgagacttgggatccaattcaggtctctcttctgtgtt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gctaatttgctccagttttatatgagacttgggatccaattcaggtctctcttctgtgtt 592
Query: 479 taaaacgaagtctttctcttcattaggtagatccatccctaggtgtttttgaaggtaatg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taaaacgaagtctttctcttcattaggtagatccatccctaggtgtttttgaaggtaatg 532
Query: 539 taaatgggaattc 551
|||||||||||||
Sbjct: 531 taaatgggaattc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_c16.g1 MSMg01no475_c16.g1 CHROMAT_FILE:
MSMg01no475_c16.g1 PHD_FILE: MSMg01no475_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(150 letters)
>mm_chr11_23623342_23623891
Length = 550
Score = 273 bits (141), Expect = 4e-78
Identities = 147/149 (98%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 1 ccattgctataacgataaagctgacttagttctctgttctgagaaaagggccactgtagg 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccattgctataacaataaagctgacttagttctctgttctgagaaaagggccactgtagg 260
Query: 61 ttcactgctgctctcctccttttaaaggtcatcctttgtctaaggaagaaac-gtgtgtg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ttcactgctgctctcctccttttaaaggtcatcctttgtctaaggaagaaacagtgtgtg 320
Query: 120 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 148
|||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtgtgtgtgtgtgtgtgtgtgtgt 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
