Query= MSMg01no475_f07.b1 MSMg01no475_f07.b1 CHROMAT_FILE:
MSMg01no475_f07.b1 PHD_FILE: MSMg01no475_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:04 2005
(249 letters)
>mm_chr11_73614041_73614689
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%)
Strand = Plus / Minus
Query: 1 gttaagacatgaatttcacttggggttttttgaacttctgatgcctgtcatacatgcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gttaagacatgaatttcacttggggttttttgaacttctgatgcctgtcatacatgcaat 316
Query: 61 gaaaagaaggtttttagttaacagtggagtagaaagctgtatgttgcagtgacatgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaaaagaaggtttttagttaacagtggagtagaaagctgtatgttgcagtgacatgcagg 256
Query: 121 tctgagttgaaatggtaatataacctttgcccccggagcatgtgagatattcttgaaatt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 255 tctgagttgaaatggtaatataacctctgcccccggagcatgtgagatattcttgaaatt 196
Query: 181 tatataaaactaagataataaagtttattcaaattatttaataacatcaatatacaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tatataaaactaagataataaagtttattcaaattatttaataacatcaatatacaaaat 136
Query: 241 aacatagaa 249
|||||||||
Sbjct: 135 aacatagaa 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_f07.g1 MSMg01no475_f07.g1 CHROMAT_FILE:
MSMg01no475_f07.g1 PHD_FILE: MSMg01no475_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:04 2005
(243 letters)
>mm_chr11_73471942_73472584
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 2 ttggggggaataatgggttctaaaattcgttgtagactccttgaatgacactgaaaatac 61
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 202 ttggggggaataatgggttctaaaattcattgtagactccttgaatgacactgaaaatac 261
Query: 62 taaggctatttagttataattttgtacgggtacatcactgtttttagggatgattgaatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taaggctatttagttataattttgtacgggtacatcactgtttttagggatgattgaatt 321
Query: 122 ggatcttggtcttaccaaacaaccacttttttttctcatatcattcaaagctcagagagt 181
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 322 ggatcttggtcttaccaaacaaccacttttttt-ctcatatcattcaaagctcagagagt 380
Query: 182 ggatgacatcattctttttgggggtaattaaaaa-tcaactgagtagtaagcaaaatgtg 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ggatgacatcattctttttgggggtaattaaaaaatcaactgagtagtaagcaaaatgtg 440
Query: 241 gtt 243
|||
Sbjct: 441 gtt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
