CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGG
AATTCTATGCATATTGCCAAGAGAGGGAAACAGTTATTAGTCCTAGCCTG
GTGCTATACTTATGGACCACTGCAATGAGTGATATGGCAAGATATCCACA
CAAGTGCAAAATGGTGTTAACACATTGATTATATACAGCAGCCATCAGAT
CGGTTCTGAGGTCCACTCAACAGGAGGAAAACATTCCTGGTACAAGAAAT
GTATCAAGTTTTCTGGGACTAGTGACATCATAGATCTAAAAGAGGATCTA
CTTTACCAGTATAATTCCTAATTATATTTTTAATCCTATCTTCATACCAA
CACATAAATATAGATACTACCCCTCATCAAAGAAGTTTCTCTTTATAGCA
AATTATGATACCACAGAAAAGCATGACTGCACATAAATCAGAGATTGATG
GATCATAGGGCCCTAGCACCAGAGAATACATCTTTACCACAGCTCTTGAA
TCTATGGTTCAGAGAACAACAAGGAAAAATGGTTGGAAAGATTATTATAG
CTTGGATAGTAGAATGTCTGCTATAATACTGTGCCTATCAAAAAAGCTTT
TTAAACAGACCCCACCATGGCGTTAACAATATAAAGGTACCACCGGGAGG
GAGAAGGAAATCCCCTTGTTCCCCCCCCCTAACAAAAAAAAAATATAAAC
CCCTACTGATTTCTTGAATAGGAAAAAAGGCCTTTCCCCCCGCTAAACCT
TTTATTTATTGCCCACACCACATCGCCAACCCCAAATTTA

NNCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGCTTTGTATGTTAACTT
AAAATTAATCAAAAAAATCAATAAAGCATAAGTGCAAACTTTAGATGGTG
ATAGGAGGTATTAGTGAAGCAAGTTTCCAGTAAATGTATTATATTGACTA
GAAAAAACATTTATTTATTGAAATAAAGTGTTTATATGTGAACTAACACC
CTGTTCTATAACACTGCATACAATAAACTTTAAAAAAGAAAACAGACCAG
AATACTTTGAGGCTCAGCTCTTTCAGCTCCTAAACTCTGGATTATAGACC
TATATGGCTTGCTTACGTGTTTTTATTTGAAGGAATATAAAGATACCTTA
TTTAATACTATTTTTAAATGCTAGGTATGAATGTCACATTCTTGATAAGC
TTTTTATAAGCAATCTCCAAATACTATTTTGCTAAATCAACTGAAGACTA
ATTATCTATTCTTTTCCAGTTGCATTTGTGTGACTATATATGGATCTTTC
TACAACATATGTCTGACATGCATGCTCTAACCACGTGCCATCGCCTCTTC
TTCCTTTTTTACAAACTGTCTTTCTTTTTTCGTTCCGGCCCCTTTTTTCC
CTCCCCTTTGCTTTACCCTCCCCTCCCTTTTTTGCCCCATACTTTTTTTA
CCTCCCCCCTTCCCTTTTTTTCCTCTCCCTTTTTTCCCCCTTCTTCT

Query= MSMg01no475_k22.g1 MSMg01no475_k22.g1 CHROMAT_FILE:
MSMg01no475_k22.g1 PHD_FILE: MSMg01no475_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:33 2005
         (432 letters)



>mm_chr11_90732213_90733044
          Length = 832

 Score =  781 bits (404), Expect = 0.0
 Identities = 425/432 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgctttgtatgttaacttaaaattaatcaaaaaaatcaataaagcataagtgcaaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgctttgtatgttaacttaaaattaatcaaaaaaatcaataaagcataagtgcaaact 260

                                                                       
Query: 61  ttagatggtgataggaggtattagtgaagcaagtttccagtaaatgtattatattgacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagatggtgataggaggtattagtgaagcaagtttccagtaaatgtattatattgacta 320

                                                                       
Query: 121 gaaaaaacatttatttattgaaataaagtgtttatatgtgaactaacaccctgttctata 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacaaacatttatttattgaaataaagtgtttatatgtgaactaacaccctgttctata 380

                                                                       
Query: 181 acactgcatacaataaactttaaaaaagaaaacagaccagaatactttgaggctcagctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactgcatacaataaactttaaaaaagaaaacagaccagaatactttgaggctcagctc 440

                                                                       
Query: 241 tttcagctcctaaactctggattatagacctatatggcttgcttacgtgtttttatttga 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcagctcctaaattctggattatagacctatatggcttgcttacgtgtttttatttga 500

                                                                       
Query: 301 aggaatataaagataccttatttaatactatttttaaatgctaggtatgaatgtcacatt 360
           |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 aggaatatgaagataccttatttaatactatttttaaattctaggtatgaatgtcacatt 560

                                                                       
Query: 361 cttgataagctttttataagcaatctccaaatactattttgctaaatcaactgaagacta 420
            ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgataagcttttcataagcaatctccaaatactattttgctaaatcaactgaagacta 620

                       
Query: 421 attatctattct 432
            |||||||||||
Sbjct: 621 tttatctattct 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)