NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTATTTAATTCTACAACAGCTATTATTTGTGTGTTGAACA
ACTGCTGAATTCTTGGACACTGCTGGTTGACATCCACCTTTGGACTAGAT
GAACCACAGTGATTATAATAAATCTCTTTTCTATAAATATAGTGAGATTC
ATTCTATAAATTCTGTTATTAGAGGATAATAAAATAAGCACATAGTTAAC
CATCCTCCACACCTTCTCCATCTAATCTCCCCATATTACCACTTGATTTT
CACCATTACCTGTATCACATATCTGTAATCTCATATTAAGTTGGATAGAA
GGCTGATTACTGCTTGAATTTATGAAAGAAAGATAAATGTAACTACAAGG
GGTCTTTCCCTATCTTTTCCTTTCTTATTGTCAAGTATATGATTGATATT
ACATAGGGTAAGATATATACTTGCTGAAGTAGTAATGTTGCATATTATCT
CTTCGGGAAAATTGAAATTCTAATTTCAAATTAGAAATTCCTGGTANAAA
ATTCCTGGTGTTCTCAGTGATACAATGGGTAAACCTTTTACTATGATGAT
ACAAATTTATAACAAGCACCAGGAAGTTTAGCAAATATATAATATATTTA
CAGCCATTAATTGATTCAAAGACACTTTATGAGGATTTAGGAGGCTTTCT
ATTTGAATTTCTGTTTGCAATTCATAGATACCTAATCCTTTCTTCCCCCC
AGGAAACAAGAACTTTAATTT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAGTCTTTATTATCTTTTA
AAAAAATTTTCCCCTGAACAAGTTATCATTGAATAGAGAGATTTTTCAGT
TTCCATTCATATGTGGGTTTTCTGTTGTTTTTGTTGTTAATGAAGACAAT
CCTTAGATCATGGTGATCTGGTAGAATGCATGGGATTATTTCAGTTTTCT
TGTATTTGTTAAGACTTGTTTGTGACCAATTATATGGACAGTTTTGGAGA
AGGTAAGAGGAGTAAGAAGAATAATTGGAAAGAAGGTTCCATGAAGTGCT
GAGAAGGTATTTATTCTTTTGTTTTAGGGTGAAATGTTCTGTAGATATGT
GTTCAGTCCATTTTTTTTCTCAACCTCTATTAGTTTTACTATGCCTTTGT
TCTTTAAGTGCTTCTTGACCATTCAAGATTCTTCTGTTGAGAATTCTGAT
TACTTCTGTATCCCATTTTTACATGGGCCATTAAGTTTTTTTTGGATATC
TCAATTCCTACTTTCACTATATATGGTGGAAATGAATACCCGTGCTGAAC
GAAACTTGGCGAAAAAAATTCCCTTTCAAAACCCGCTATTTTCCCTAAAG
ATAAAATCCCCTCTATCACAAATGGTCAACCGACCTTCGCGTCCGTTATC
CATTCGAGACCCCCCTTATCCAGTATTAGCCTTTTTCTGCCCCACTTATC
TCTTTCTCTC

Query= MSMg01no476_f06.b1 MSMg01no476_f06.b1 CHROMAT_FILE:
MSMg01no476_f06.b1 PHD_FILE: MSMg01no476_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:24 2005
         (496 letters)



>mm_chr11_27632165_27633060
          Length = 896

 Score =  930 bits (481), Expect = 0.0
 Identities = 490/493 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttgttatttaattctacaacagctattatttgtgtgttgaacaactgctgaa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ggaattctttgttatttaattctacaacagctattatttgtgtgttgaacaactgctgaa 814

                                                                       
Query: 64  ttcttggacactgctggttgacatccacctttggactagatgaaccacagtgattataat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ttcttggacactgctggttgacatccacctttggactagatgaaccacagtgattataat 754

                                                                       
Query: 124 aaatctcttttctataaatatagtgagattcattctataaattctgttattagaggataa 183
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 753 aaatctcttttctataaatatagtgagattcactctataaactctgttattagaggataa 694

                                                                       
Query: 184 taaaataagcacatagttaaccatcctccacaccttctccatctaatctccccatattac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 taaaataagcacatagttaaccatcctccacaccttctccatctaatctccccatattac 634

                                                                       
Query: 244 cacttgattttcaccattacctgtatcacatatctgtaatctcatattaagttggataga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cacttgattttcaccattacctgtatcacatatctgtaatctcatattaagttggataga 574

                                                                       
Query: 304 aggctgattactgcttgaatttatgaaagaaagataaatgtaactacaaggggtctttcc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aggctgattactgcttgaatttatgaaagaaagataaatgtaactacaaggggtctttcc 514

                                                                       
Query: 364 ctatcttttcctttcttattgtcaagtatatgattgatattacatagggtaagatatata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctatcttttcctttcttattgtcaagtatatgattgatattacatagggtaagatatata 454

                                                                       
Query: 424 cttgctgaagtagtaatgttgcatattatctcttcgggaaaattgaaattctaatttcaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cttgctgaagtagtaatgttgcatattatctcttcgggaaaattgaaattctaatttcaa 394

                        
Query: 484 attagaaattcct 496
           |||||||| ||||
Sbjct: 393 attagaaaatcct 381


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)