Query= MSMg01no477_b23.b1 MSMg01no477_b23.b1 CHROMAT_FILE:
MSMg01no477_b23.b1 PHD_FILE: MSMg01no477_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:28 2005
(469 letters)
>mm_chr11_52442230_52443098
Length = 869
Score = 793 bits (410), Expect = 0.0
Identities = 431/438 (98%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 32 ccctatccctccatcaccacagatcactacagatgtttcttctctctgagaagggtcctt 91
||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| |
Sbjct: 869 ccctatccctccatcactacagatcactacagatgttccttccctctgagaagggtcc-t 811
Query: 92 tgtgaccctctcagcctccccaggcattttgtgatagctgacctccccatctcaagacca 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tgtgaccctctcagcctccccaggcattttgtgatagctgacctccccatctcaagacca 751
Query: 152 tgaactcaaccccatctgcaaagtccccttgccatggaaggtggcatgatcagattctgg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgaactcaaccccatctgcaaagtccccttgccatggaaggtggcatgatcagattctgg 691
Query: 212 ggtttggaacggggacatcttcagccctccaatgtcctgagacagaatctttcaaatggc 271
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 690 ggtttggaacggggacatcttcagccctccaatgtcctgagacagaatctttcaaaaggc 631
Query: 272 aagttcttgctctctagagtcatgcttatctctacagtgggagtcattaagctgtagctt 331
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aagttcttgctctctagagtcatgcttatctctacagtgggagtcattaagctgtagctc 571
Query: 332 cctccccttcccgccgtgggaagggggacagaggacactgtcctgcccagtgcttctagg 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cctccccttcccgccgtgggaagggggacagaggacactgtcctgcccagtgcttctagg 511
Query: 392 cttggtctgggactccctcctctcagcagaatctcagtggaagacacacaagccttaaat 451
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 510 cttggtctgggactccctcctctcagcagaatctcagtggaagtcacacaagccttaaat 451
Query: 452 atccttagcttgttctga 469
||||||||||||||||||
Sbjct: 450 atccttagcttgttctga 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_b23.g1 MSMg01no477_b23.g1 CHROMAT_FILE:
MSMg01no477_b23.g1 PHD_FILE: MSMg01no477_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:28 2005
(564 letters)
>mm_chr11_52242814_52243777
Length = 964
Score = 540 bits (279), Expect = e-157
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 274 acacacacacacacacacacacacacacacaccctggagcagaaacacccagaggcaagg 333
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 474 acacacacacacacacacacacacacacacaccccggagcagaaacacccagaggcaagg 533
Query: 334 tgtatcgtgccgggtgtgacagtgtgggtgtgacagcgtggctggcaggtgccaggcatg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tgtatcgtgccgggtgtgacagtgtgggtgtgacagcgtggctggcaggtgccaggcatg 593
Query: 394 gggagaggatgtccctttgtcactgagagccccttcagccatactgagctcccagccctc 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gggagaggatgtccctttgtcactgagagccccttcagccatactgagctcccagccctc 653
Query: 454 actgtgactccctggctccttgtcctgactggcttcttagaggtcactgaagagggaggg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 actgtgactccctggctccttgtcctgactggcttcttagaggtcactgaagagggaggg 713
Query: 514 catgactgctgtgtgtgtgtgtgtggggggtctcggggaaccagcatctag 564
||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 714 catgactgctgtgtgtgtgtggggggggggtctcggggaaccagcatctag 764
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
