ATATTTGGGCGCTATAGACTCCTATTCAAGAGAGCGCGGATTCACCTTAC
CGAATACTTGGTCTTGGGGATTAAGGCCACAGAAATGCGCTTTCGCTGAG
CTGCATCCCCAGCCTTCTCTGCACTTTTACACAGAACTGAATAAGTTTGA
AGGGATGGAAAAATAATTCTTTCTTTCCAGTCTGGGAAACTGTTCTCATA
AATGTTGCACAGTTTTAAGGTGGTTAGCTCTAAGTTCAGCACCGAGTGAG
ATCTTTTGTGTTGGTTTTCATGTTGGTGATGATTCGGAATTTATTCTGGA
GCATTCACACATAATGGGTGCTGCATAAATGCTAAATCTCTTCCTCTGGG
CCCTTTGGCCCAACAAGGCTAAAAACAAAGCTGCTAAAAAACTGTGAAGG
TCCCTCGGGCCCGACAAAAAGGAAAAGCTGGGTTTGACCAAAAGGGGGGG
TGGGGTTTGCCCAAAAGGAAATCCGGGGTTGTCACCCAAAGGGGGGTGTG
GGTTGTCCCCAAAAGGAAAGGGGGGCCCTAAACCAAAAGGGAGAGCGGGG
GCCCAAAAAATAAAGGGAGGCGGTGGTTTTGCCCACAAAGGGAAATTTTT
TTTTTTCAAAGGGCCCAATGGTGGCTTTTTTTAAAAAAAAAAAAAATTCT
CTTTTTTAAAAACACC

TGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCCACCTAGAGATTCAGGACAGCACATGCTCA
CGCTATGTGCATACCTGGTCACACATACCATTGTGTGGGACTCATGCAGG
CAGCAGCAGACTAGACAGCAGCCTATATTGTGATTTTAAGAACGTCAGTA
ATGTTTCAGTGACTGAGTAAGTCTCTTCCAACTGCCAGCTAAGTCCTGAT
CATCAGGCTTGAAGCACTAGACCAGCTTAAGGGTTTTGCTTTGTTTTGTT
TGGTTTTGTTTTGTTTGGTTTTGTTTTGTTGGGGAAACACATTCATCAGG
AAGCAGCAAGACTTTCAGCTGGGACACAGCTTCTGTCCCGCTTCCCTCAA
AGAAGGAGTTGGTAGAGGAGAACTGTGAAATGTCTTTACAGAGCAGGAAG
AGGAGCCCCCGAAGTGTGACAAGGCAGGAGGACACTGACGGCAGCACTGC
AAATAACCACTTGACAGGTGTGCCTGGAGTCAGCCTAACAAGGTGTTCTG
CTTGTGGAGGCTTGGTTCCACCTTAAATTGCTGGAAAGAAAGGGAGAGGG
AGGGGGGGAAAGGGGGAGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNTNN
TNNGGNNNTGTTTNGGNNGGTGTGTGNTTGTGTTTTTGGTGGTGTTTTGT
TTGTGTTTGTTTTTTTTTTTTTGGTTTTTTG

Query= MSMg01no478_d16.g1 MSMg01no478_d16.g1 CHROMAT_FILE:
MSMg01no478_d16.g1 PHD_FILE: MSMg01no478_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:54 2005
         (553 letters)



>mm_chr11_93529404_93530356
          Length = 953

 Score =  944 bits (488), Expect = 0.0
 Identities = 536/556 (96%), Gaps = 9/556 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacctagagattcaggacagcacatgctcacgctatgtgcatacctggtcacacatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacctagagattcaggacagcacatgctcacgctatgtgcatacctggtcacacatac 260

                                                                       
Query: 61  cattgtgtgggactcatgcaggcagcagcagactagacagcagcctatattgtgatttta 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cattgtgtgggactcatgcaggcagcagcagactagacagcagcatatattgtgatttta 320

                                                                       
Query: 121 agaacgtcagtaatgtttcagtgactgagtaagtctcttccaactgccagctaagtcctg 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 321 agaacgtcagtaatgtttcagtgactgagtaagtctctttcaactgccagcaaaggcctg 380

                                                                       
Query: 181 atcatcaggcttgaagcactagaccagcttaagggttttgctttgttttgtttggttttg 240
           ||||||||||||||||||||||||||||||||||||     |||||||||||| ||||||
Sbjct: 381 atcatcaggcttgaagcactagaccagcttaagggt-----tttgttttgttttgttttg 435

                                                                       
Query: 241 ttttgtttggttttgttttgttggggaaacacattcatcaggaagcagcaagactttcag 300
           |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 436 ttttgttttgttttgttttgtttgggaaacacatttatcaggaagcagcaagactttcag 495

                                                                       
Query: 301 ctgggacacagcttctgtcccgcttccctcaaagaaggagttggtagaggagaactgtga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctgggacacagcttctgtcccgcttccctcaaagaaggagttggtagaggagaactgtga 555

                                                                       
Query: 361 aatgtctttacagagcaggaagaggagcccccgaagtgtgacaaggcaggaggacactga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatgtctttacagagcaggaagaggagcccccgaagtgtgacaaggcaggaggacactga 615

                                                                       
Query: 421 cggcagcactgcaaataaccacttgacaggtgtgcctggagtcagcctaacaaggtgttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cggcagcactgcaaataaccacttgacaggtgtgcctggagtcagcctaacaaggtgttc 675

                                                                       
Query: 481 tgcttgtggaggcttggttccaccttaaattgctggaaagaaagggagagggag-ggg-- 537
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||  
Sbjct: 676 tgcttgtggaggcttggttccaccttaaattgctggaaaggaagggagagggagagggag 735

                           
Query: 538 -gggaaagggggaggg 552
            |||| |||| |||||
Sbjct: 736 agggagagggagaggg 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)