Query= MSMg01no478_p20.b1 MSMg01no478_p20.b1 CHROMAT_FILE:
MSMg01no478_p20.b1 PHD_FILE: MSMg01no478_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:49 2005
(324 letters)
>mm_chr11_85649321_85650042
Length = 722
Score = 596 bits (308), Expect = e-175
Identities = 320/324 (98%), Gaps = 2/324 (0%)
Strand = Plus / Minus
Query: 1 gttcctagcatctgtagagcttgggcagattgtcccaggcgccctcttttcatttagatt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 522 gttcctagcatctgtagagcttgggcagattgccccaggcgccctcttttcatttagatt 463
Query: 61 cccagtcctgagccaagaaacgaaggaataaaatgtaaaaatgtcagcgggagcctgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cccagtcctgagccaagaaacgaaggaataaaatgtaaaaatgtcagcgggagcctgagt 403
Query: 121 ctctactaattgctaagtaaacatctccactccaactatggcccagctgtgttgagtgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctctactaattgctaagtaaacatctccactccaactatggcccagctgtgttgagtgcc 343
Query: 181 tcggggggagtatgtgtgtctgtgtgggtttgagggggagcccgggggatttatgtgggt 240
|| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 342 tc-gggggagtatgtgtgtctgtgtgggtatgagggggag-ccgggggatttatgtgggt 285
Query: 241 gctgctcttctgaatctgagtgggtggtgagttcttgaagctctctgcaatgctgctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gctgctcttctgaatctgagtgggtggtgagttcttgaagctctctgcaatgctgctgct 225
Query: 301 atcaggtgggtttgaatggagggt 324
||||||||||||||||||||||||
Sbjct: 224 atcaggtgggtttgaatggagggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 722
Length adjustment: 9
Effective length of query: 315
Effective length of database: 713
Effective search space: 224595
Effective search space used: 224595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_p20.g1 MSMg01no478_p20.g1 CHROMAT_FILE:
MSMg01no478_p20.g1 PHD_FILE: MSMg01no478_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:49 2005
(392 letters)
>mm_chr11_85466553_85467344
Length = 792
Score = 750 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Plus
Query: 1 acatctaaaatgaagatcaagatatctatatcttgttgcacacacacatgtgaaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatctaaaatgaagatcaagatatctatatcttgttgcacacacacatgtgaaattaaa 260
Query: 61 tttcatcaattttaaaaacatcatctcctagcgatttaccactagtaataggatgtcaca 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tttcatcaattttaaaaacatcatctcctagtgatttaccactagtaataggatgtcaca 320
Query: 121 cttgtatgtagcatgactttgtgtgtttaatggaaacctttgcagtatataatacagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgtatgtagcatgactttgtgtgtttaatggaaacctttgcagtatataatacagcat 380
Query: 181 taacagttaccatgctgtctgaaactttgtcctcctgggtcagcagccaccatgctcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacagttaccatgctgtctgaaactttgtcctcctgggtcagcagccaccatgctcctt 440
Query: 241 tcttctctgacctgtagattgcgtgtctcagatcaggtagttttctcttcctgtctagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctctgacctgtagattgcgtgtctcagatcaggtagttttctcttcctgtctagct 500
Query: 301 tgtttcacttagcataatgtcttctttactcatccatgtcgctgcaaatgacaggacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtttcacttagcataatgtcttctttactcatccatgtcgctgcaaatgacaggacatt 560
Query: 361 ttctttatccgtccatgcattgatgggaatta 392
||||||||||||||||||||||||||||||||
Sbjct: 561 ttctttatccgtccatgcattgatgggaatta 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
