Query= MSMg01no479_a10.b1 MSMg01no479_a10.b1 CHROMAT_FILE:
MSMg01no479_a10.b1 PHD_FILE: MSMg01no479_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:52 2005
(677 letters)
>mm_chr11_65281114_65282190
Length = 1077
Score = 1280 bits (662), Expect = 0.0
Identities = 672/676 (99%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 1 ttgaccatgctaaacatgttagtgcattctacattattacaatatgatatgggaggcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaccatgctaaacatgttagtgcattctacattattacaatatgatatgggaggcagt 260
Query: 61 tacctctacaaaggagatagtagagcacgtggttcaggatgttcaaagtccaataagcat 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 tacctctacaaaggagatagtagagcacgtggttcaggacgttcaaagtccaataagcat 320
Query: 121 ggtaccacttctgagagcatcctcccttggctgtcatctgatggtccatgtggaggtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtaccacttctgagagcatcctcccttggctgtcatctgatggtccatgtggaggtatc 380
Query: 181 atgtgtgtcttagtcagggtttctattcctgcacgaaacatcgtgaccaagaagcaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtgtcttagtcagggtttctattcctgcacgaaacatcgtgaccaagaagcaggtt 440
Query: 241 ggggaggatagggtttattacactttcacattgctgttcatcaccgaaacaaatcagaac 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggaggaaagggtttattacactttcacattgctgttcatcaccgaaacaaatcagaac 500
Query: 301 aggaactcatgcaggttggaacttggaagcaggagctggtgcggaagccatggaggagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaactcatgcaggttggaacttggaagcaggagctggtgcggaagccatggaggagtg 560
Query: 361 ctgcctactagcttgcttcccctggcttgctcagcctgcttgcttattgagcccaagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgcctactagcttgcttcccctggcttgctcagcctgcttgcttattgagcccaagact 620
Query: 421 accagcccaaggaaggcaccacccacaattggccctcccacagttcatctctaattgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accagcccaaggaaggcaccacccacaattggccctcccacagttcatctctaattgaaa 680
Query: 481 taatgccttacagatggatctcatggaggcatttcctcaagggaggctcctttctctgtg 540
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 t--tgccttacagatggatctcatggaggcatttcctcaagggaggctcctttctctgtg 738
Query: 541 gtaaattcagcttgtgtcaagtggacacacaaaacaatccagtataatgtggtatcctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtaaattcagcttgtgtcaagtggacacacaaaacaatccagtataatgtggtatcctga 798
Query: 601 actttgggaaggagatgtctgggaccctcatcataagaaacatctgttgacaactaatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 actttgggaaggagatgtctgggaccctcatcataagaaacatctgttgacaactaatga 858
Query: 661 gattccatgaaacatg 676
||||||||||||||||
Sbjct: 859 gattccatgaaacatg 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_a10.g1 MSMg01no479_a10.g1 CHROMAT_FILE:
MSMg01no479_a10.g1 PHD_FILE: MSMg01no479_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:52 2005
(323 letters)
>mm_chr11_65442616_65443338
Length = 723
Score = 601 bits (311), Expect = e-176
Identities = 320/323 (99%)
Strand = Plus / Minus
Query: 1 gtacacagctgaacaaggaagaggcagggctaatattgcagtgacgataggggtcttatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtacacagctgaacaaggaagaggcagggctaatattgcagtgacgataggggtcttatc 464
Query: 61 ttcagatataaatgcctgggtgggtggagaaagctgcagtggatattgtctgtactcact 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 463 ttcagatataaatgcctgggtgggtggagaaagctgcagtggatatcgtctgtactcact 404
Query: 121 gtcaatatctatacataggctagaggaaggcttggccgtccctctgggccttatcgctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtcaatatctatacataggctagaggaaggcttggccgtccctctgggccttatcgctgg 344
Query: 181 ggtcagggaagctctggcattcacctgaggcattagatcctttgcatggcaatgctcttg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 343 ggtcagggaagctctgacattcacctgaggcattagatcctttgcatggcaatgctcatg 284
Query: 241 tgaacaatagacattcactcaggactttatccatattcactcaaggcttcctcagcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgaacaatagacattcactcaggactttatccatattcactcaaggcttcctcagcttcc 224
Query: 301 cacattatataaatataatacac 323
|||||||||||||||||||||||
Sbjct: 223 cacattatataaatataatacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
