ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAA
TTCTTTGTTTTCCTCTGAGGCCCATTTTTAATGGGGTTCTTTGATTTTCT
GGAGTCCATTTTCTTGAGTTCTTTATATATATTAGATATTAGTTACCTAT
CGAATTTAGGATTGGTAAAGATCCTTTCCCAATCTGAGGGTGGCCTTTTT
GTCTTATTGACAGTGTCTTCTGCCTTACAGAATCTTTGCAATTTTATGAG
GTCTCATTTGTTGATTCTTGATCTTACAAGACAAGCTATTGTTGTTCTGT
TCAGGAATTTTTCTGCTGTGCCCATATCTTCAAGGCTTTTCCACACTTTC
TCCTCTATAAGTCTTGGTGTCTCTGGTTTTATGGGGAGTTCCTTGATCCA
AATATACTTGAGCTTTGTACAAGGAGATAAGAATGGATCAGTTTGCATTC
TCCTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTC
TTTTTTTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCA
TCGGTGTGTGGGTTCATTTCTGGGTCATCAATTCTATTCAGTTGATCCAC
CTGTCTATTGCTATACCAGTACCATGCAGTTTTTATCACAATTGCTTTGC
AGTACAGCTTGAGGTCAGGCATGGTGATTCCCCCAGAGGTTCTTTTATTG
TTGAGAANTAGTTTTGCTATCCTAGTTTTTTTGTTATTAGAGAAGAAATT
TGCAATGCTCCCTCTCACTCTGTGGAGGAGTGAG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAAGTGTGTGGGGTGGAGCTAGGAGGATCA
GAGGATTGAGACCAATATCAACTAGATGGTGAGACTGTGTTCAAAAGAAA
ATAAAATTAAAGAATAAGAAATAAAAAAAAATAAAGGAAAACATACACAT
GGTAATTCTGCTTTATCTGACACCTTGGCGATGTGATGTTCAACTAGGTG
GTTGAAAAGTGAGGTGAGGAGCTAAGTGGTAGGTCAGGTGACAGCTTGCT
GGATTGCTTTGAGCCTTTTTCCTTCCATGCCAAACTGCCATTTGTACAAA
TGGGGATTTGAACAGATCATCATGAGCCCTGTCAGCATCAACAGGCCAGC
CCACAGATGTCAGTGTGTCCTGACGACAGATATGCACCATCATCAGGCTA
TCCACAGACATCAGTGTGCCGTGCACAACTATGCTGCTCCTGGGTCGCTG
AGATTTCTATGCATCTCATGCAGCCGCTTTTCAAACTGTGGCATATGCTC
CTAATTTACACTTATTAAAGCTCAGCTCATTTGTCTATGGTCTGTTTTTC
AAGATGACTTAGAAGAAATCAGAATTTGTGTGCTATTCATTGCCTCTCAG
AAGCGGATTTTCAAGATGTATTTAGGCAATGGTATTTTCCACAGCATAAT
TGTATCCTAATGTGAAAACTGCAAATATATTTCTTTCTCCACATTTGGCA
AAACCTTAAATGACCCCATATTTTAGTGT

Query= MSMg01no479_f20.g1 MSMg01no479_f20.g1 CHROMAT_FILE:
MSMg01no479_f20.g1 PHD_FILE: MSMg01no479_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:20 2005
         (609 letters)



>mm_chr11_26621919_26622927
          Length = 1009

 Score = 1075 bits (556), Expect = 0.0
 Identities = 594/610 (97%), Gaps = 7/610 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caagtgtgt-ggggtggagctaggaggatcagaggattgagaccaatatcaactagatgg 59
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 caagtgtgtgggggtggagctaggaggatcagaggattgagaccaatatcaactagatgg 868

                                                                       
Query: 60  tgagactgtgttcaaaagaaaataaaattaaagaataagaaataaaaaaaaataaaggaa 119
           |||||||||||||||||||||||||||||||| ||||||      |||||||||||||||
Sbjct: 867 tgagactgtgttcaaaagaaaataaaattaaaaaataag------aaaaaaataaaggaa 814

                                                                       
Query: 120 aacatacacatggtaattctgctttatctgacaccttggcgatgtgatgttcaactaggt 179
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 813 aacatacacatggtaattctgctttatctgacgccttggcgatgtgatgttcaactaggt 754

                                                                       
Query: 180 ggttgaaaagtgaggtgaggagctaagtggtaggtcaggtgacagcttgctggattgctt 239
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ggttgaaaagtgaggtgaagagctaagtggtaggtcaggtgacagcttgctggattgctt 694

                                                                       
Query: 240 tgagcctttttccttccatgccaaactgccatttgtacaaatggggatttgaacagatca 299
           ||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 693 tgagccaagttccttccatgccaaactgccatttgtacaaaaggggatttgaacagatca 634

                                                                       
Query: 300 tcatgagccctgtcagcatcaacaggccagcccacagatgtcagtgtgtcctgacgacag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcatgagccctgtcagcatcaacaggccagcccacagatgtcagtgtgtcctgacgacag 574

                                                                       
Query: 360 atatgcaccatcatcaggctatccacagacatcagtgtgccgtgcacaactatgctgctc 419
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 573 atatgcaccatcatcaggctatccacagacatcagtgtgccctgcacaactatgctgctc 514

                                                                       
Query: 420 ctgggtcgctgagatttctatgcatctcatgcagccgcttttcaaactgtggcatatgct 479
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctgggccgctgagatttctatgcatctcatgcagccgcttttcaaactgtggcatatgct 454

                                                                       
Query: 480 cctaatttacacttattaaagctcagctcatttgtctatggtctgtttttcaagatgact 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cctaatttacacttattaaagctcagctcatttgtctatggtctgtttttcaagatgact 394

                                                                       
Query: 540 tagaagaaatcagaatttgtgtgctattcattgcctctcagaagcggattttcaagatgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tagaagaaatcagaatttgtgtgctattcattgcctctcagaagcggattttcaagatgt 334

                     
Query: 600 atttaggcaa 609
           ||||||||||
Sbjct: 333 atttaggcaa 324


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)