Query= MSMg01no479_g02.b1 MSMg01no479_g02.b1 CHROMAT_FILE:
MSMg01no479_g02.b1 PHD_FILE: MSMg01no479_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:21 2005
(664 letters)
>mm_chr11_72177170_72178232
Length = 1063
Score = 1210 bits (626), Expect = 0.0
Identities = 638/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 23 aaaaatgagggaagaaaagtaaggcttgaaagctcattgtttaactctgccaagttactg 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aaaaatgagggaagaaaagtaaggcttgaaagctcattgtttaactctgccaagttactg 282
Query: 83 agaggagcgagagctgacggtgccctgtccacggtctcacaggcaagttggcactgggcc 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agaggagcgagagctgacggtgccctgtccacggtctcacaggcaagttggcactgggcc 342
Query: 143 aggagcagacctcttatcatctcatgttcaaggaagacttcaaaacagctgattgcatca 202
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aggagcagacctctcatcatctcatgttcaaggaagacttcaaaacagctgattgcatca 402
Query: 203 gtctggtgggaaacgctgggacggctattgagcaacgtgtacatgctctaagtctatgga 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtctggtgggaaacgctgggacggctattgagcaacgtgtacatgctctaagtctatgga 462
Query: 263 atgactagatcagatccactgaggtctgttgctcttgcatggcctagcccttcatcttgt 322
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgactagatcagacccactgaggtctgttgctcttgcatggcctagcccttcatcttgt 522
Query: 323 ggctttcagaagatgaagaaacattcctaaggtaaggagatggtgccatggataaagtac 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggctttcagaagatgaagaaacattcctaaggtaaggagatggtgccatggataaagtac 582
Query: 383 ttaccatacaagcctggggaccgaagttcagatccctgagcccacagaagtacaagggcc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttaccatacaagcctggggaccgaagttcagatccctgagcccacagaagtacaagggcc 642
Query: 443 gagaagtgagcctgtaattccaaccctccagaggcgaagatggaggatctccagagcaag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gagaagtgagcctgtaattccaaccctccagaggcgaagatggaggatctccagagcaag 702
Query: 503 ctggctggctagactagcccagtcagcaagttctgagttcagctgagactctatctccat 562
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 703 ctggctggctagactagcccagtcagcaagtcctgagttcagctgagactctatctccat 762
Query: 563 gaaggaagggaccagatatcaacttcaggtctccacatgcacacgtgtgcactctattga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gaaggaagggaccagatatcaacttcaggtctccacatgcacacgtgtgcactctattga 822
Query: 623 acatggacagacacacagaggggggtggggaggggtgttcct 664
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 823 acatggacagacacacagaggggggtggg-aggggtgttcct 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space: 688662
Effective search space used: 688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_g02.g1 MSMg01no479_g02.g1 CHROMAT_FILE:
MSMg01no479_g02.g1 PHD_FILE: MSMg01no479_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:21 2005
(232 letters)
>mm_chr11_72371302_72371933
Length = 632
Score = 433 bits (224), Expect = e-126
Identities = 230/232 (99%)
Strand = Plus / Minus
Query: 1 ctgtgtttatactaatgatggagttcagcctgtggcctgagaccaaagtatgtgtgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctgtgtttatactaatgatggagttcagcctgtggcctgagaccaaagtatgtgtgctgg 373
Query: 61 ggaaactccattttatttaacagaaacacagcgctttctccattccagccagtcactatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggaaactccattttatttaacagaaacacagcgctttctccattccagccagtcactatg 313
Query: 121 gtaacccccaaaggacagcatggtctgaccagtggtagggtgtacatcagtgactggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtaacccccaaaggacagcatggtctgaccagtggtagggtgtacatcagtgactggcca 253
Query: 181 caaaactccaacatgggcaacacagcagacccctccctccctccctcactcc 232
|||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 252 caaaactccaacatgggcaacacagcagacccctccctccttccctccctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
