NACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCG
CGGAATTCATCTTTACCTAGAGAGAGGGCATCGGAGGAGGAATGTGCATT
TTAAAATTTTCATTTTGAAAAGCTTAAAGTATTGTAATGAGTGGCCCGAT
GAACTCCTTGTTAAGTGTTGCCCAGATTGAACAATCAAGTTTTATTTCAC
AAACTTAAGATCAGTTACAAAAAATATAAGCCAAAATAGAGTCATATTAG
TACTAATATAAGAGGGAGGCTCAGCTCTGTTAGAATTGCAACAAAAAAAC
TAGACCCTACAGTGAACTACTTATATAGTAAAGAATTGCTAAGGGACAGG
AAACAAATGAAGCAGGAGACAGGCCTTCTTGGAATGATGCACACTGATGA
TAGATGGAGAGAAAGGTGGGTTCTGAACGTCTTGCTTTGCTTTTGGCCTT
TCTGTCAGGGAAAATGTGATCGTTCTCAAAAACAAACAAACAAACAAACA
CGTAGAACAGTCATTCTGAGAAGAGTGAAAGTTCTGGCTCCACAAAGTGA
CGCTTTCCTAAATGGGCTCAGTCCTCTGGGTTCGTGAATAATTATATTTC
AGACTGAACTCTAAACAAGTGTATCATCTACATAGCATCTTTTGTAAACA
ACAGAGGCTGGCGCCTTCAGGCAGAACCAAAATGCATTTTGGTAATCTTC
CCTCCTTCCCTTCAAAAGCATCTCATGTTAGACATATGAACAGAAGGTTG
CCTCCATACGAATCCCN

CCATTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAAAAGAATTCTGNTNACTCATCCATTCTGTTAG
CGTGTGTCTTTTTATTAGAGGACTCAGTCCATTGATATTGAGAGATATTA
ATGATCAATGATTTCTTCCTGTTATTTTGATGTTGATGGTGTTTGAGTGT
GTGTGTGTGTTTACATTTCTCTTCTATTGGTTTTAATGGTGTGAAATTAT
TTATTTCTTCTGTTTTCTTGAGTGTAGTTAGCCTCGTTGGGTTGGAGTTT
TCCTTCTAGAATCTTGTTCAGTGCTTGGTCAGTGTAAAGATGTTGTTTGA
ATGTGGTTTTATCATGCAATATCTTGGTTCCTCCATCTATGGTGATTAAA
AAGTTTGCTGGATATAGTAGTTTGTGCTGACAGCTGTGGTCTCTTTCTTT
TTTATTTATTAATTTATTTATTTACACTCCATATTTTATTTCTCCCCATC
CACCACCCGATTGTTCCACATCCCATACTTCCTCCTCACCCCCCACCTCA
CCTGGCCTCTAAACTCCAGTCTCTTGAGGGTTATGTGCATCTTCTCTGAA
TGAACACAGACCTGGCAGACCTCTACTGTATGTGTTTTGGGCGTTTCATT
TTTTTTTTTTTTTGATGTCTGTTTGGTGTTTCCCCGTCTTATAAATTTTT
AGACCTTATTCATTATCCGTTCTTCTCTACTCCTGTATTTTTTTTTTC

Query= MSMg01no479_m10.b1 MSMg01no479_m10.b1 CHROMAT_FILE:
MSMg01no479_m10.b1 PHD_FILE: MSMg01no479_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:53 2005
         (585 letters)



>mm_chr11_23574647_23575631
          Length = 985

 Score = 1054 bits (545), Expect = 0.0
 Identities = 572/585 (97%), Gaps = 7/585 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagagggcatcggaggaggaatgtgcattttaaaattttcattttgaaaagcttaaagta 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gagagggcatcggaggaggaatgtgcatttaaaaattttcattttgaaaagcttaaagta 260

                                                                       
Query: 61  ttgtaatgagtggcccgatgaactccttgttaagtgttgcccagattgaacaatcaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtaatgagtggcccgatgaactccttgttaagtgttgcccagattgaacaatcaagtt 320

                                                                       
Query: 121 ttatttcacaaacttaagatcagttacaaaaaatataagccaaaatagagtcatattagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatttcacaaacttaagatcagttacaaaaaatataagccaaaatagagtcatattagt 380

                                                                       
Query: 181 actaatataagagggaggctcagctctgttagaattgcaacaaaaaaactagaccctaca 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaatataagagggaggctcagctctgttagaattgcaacaaaaaaactagaccctaca 440

                                                                       
Query: 241 gtgaactacttatatagtaaagaattgctaagggacaggaaacaaatgaagcaggagaca 300
           |||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaactactaagagagtaaagaattgctaagggacaggaaacaaatgaagcaggagaca 500

                                                                       
Query: 301 ggccttcttggaatgatgcacactgatgatagatggagagaaaggtgggttctgaacgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccttcttggaatgatgcacactgatgatagatggagagaaaggtgggttctgaacgtc 560

                                                                       
Query: 361 ttgctttgcttttggcctttctgtcagggaaaatgtgatcgttctcaaaaacaaacaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgctttgcttttggcctttctgtcagggaaaatgtgatcgttctcaaaaacaaacaaac 620

                                                                       
Query: 421 aaacaaacacgtagaacagtcattctgagaagagtgaaagttctggctccacaaagtgac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacaaacacgtagaacagtcattctgagaagagtgaaagttctggctccacaaagtgac 680

                                                                       
Query: 481 gctttcctaaatgggctcagtcctctgggttcgtgaataattatatttcagactgaactc 540
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gctttcctaaatgggctcagtcctctgggttcgtgaatagttatatttcagactgaactc 740

                                                        
Query: 541 taaacaagtgtatcatctacatagcatcttttgtaaacaacagag 585
                  ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 -------gtgtatcatctacatagcatcttttgtaaacaacagag 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)