Query= MSMg01no480_p15.b1 MSMg01no480_p15.b1 CHROMAT_FILE:
MSMg01no480_p15.b1 PHD_FILE: MSMg01no480_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:26 2005
(635 letters)
>mm_chr11_86333154_86334187
Length = 1034
Score = 1143 bits (591), Expect = 0.0
Identities = 624/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 aatgtccctggaaaggagcatgggaggcagcagtactaaccactgagatactcgaggatg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgtccctggaaaggagcgtgggaggcagcagtactaaccactgagatactcgaggatg 260
Query: 61 aggtagagcttccctccggtctgaaaggcataaatcaggtccacaatgaaagggtgtttc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtagagctttcctccggtctgaaaggcataaatcaggtccacaatgaaagggtgtttc 320
Query: 121 acttcctccagaatgttccgctctgctttcgtgtgggccgtgtccttagcattcctcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcctccagaatgttccgctctgctttcgtgtgggccgtgtccttagcattcctcact 380
Query: 181 atcattgcctaaaggaaaagagatggtctataagaacaaaatagtcaacattttgatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcattgcctaaaggaaaagagatggtctataagaacaaaatagtcaacattttgatcct 440
Query: 241 atgttttctggaaaaatctactttatgcttttcaggctaatacaaaatagtttctaccag 300
||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 atggtaactggaaaaatctactttatgcttttcaggctaatacacaatagtttctaccag 500
Query: 301 aaacggaggtgggtgagggtaatggaggctactcactgtttataaatatcgaaatttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacggaggtgggtgagggtaatggaggctactcactgtttataaatatcgaaatttgct 560
Query: 361 cgggttttgtagtaaatatgtaaatgaaaaccaagacaggtttttctagacatatgtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 cgggttttgtagtaaatatgtaaatgaaaaccaagacaggtttttctagacatctgtaaa 620
Query: 421 cagatcaagtttatgcatatattcacttacaggtgagaccttagtgtgcccccaacttta 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 cagatcaagtttatgcatatattcacttacaggtaagaccttagtgtgcccccaacttta 680
Query: 481 ggccaagagagtaggaataaaataaggaatcctgtccttgtagcccagagtatcaaggga 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggccaagagagcaggaataaaataaggaatcctgtccttgtagcccagagtatcaaggga 740
Query: 541 aaagatgtcaatgaaagcaagaacagaatgctaagagtaagcacagcaagtgcactcaac 600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagatgtcaatgaaagcaagaa-agaatgctaagagtaagcacagcaagtgcactcaac 799
Query: 601 ctggcaagatgctttcctgagtgaccagacaacaa 635
|||||||||||||||||||||||||| ||||||||
Sbjct: 800 ctggcaagatgctttcctgagtgacccgacaacaa 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_p15.g1 MSMg01no480_p15.g1 CHROMAT_FILE:
MSMg01no480_p15.g1 PHD_FILE: MSMg01no480_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:27 2005
(568 letters)
>mm_chr11_86527071_86528039
Length = 969
Score = 1019 bits (527), Expect = 0.0
Identities = 558/569 (98%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 1 tcccagcccctgtgtgttggcttgttcacaaagtacctgcaattccaggtgcacctaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tcccagcccctgtgtgttggcttgttcacaaagtacctgcaattccaggtgcacctaatg 710
Query: 61 cttcaggcccttgcgggctgtattcatgtgtacatcaccatacacagaatcaaaaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cttcaggcccttgcgggctgtattcatgtgtacatcaccatacacagaatcaaaaataaa 650
Query: 121 atatttagagcattagttttatgcacaaactgttgtgaaggtttagataaacatttaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 649 atatttagagcattagttttatgcacaaactgttgtgaaggtttagataaacaggaaaac 590
Query: 181 gccatagttctagtcagaaatgaactagctaagtagtctccttgcatgttttcccctagn 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gccatagttctagtcagaaatgaactagctaagtagtctccttgcatgttttcccctagt 530
Query: 241 ngttgaaacgtgtgttttatgtgcacagaagactaatgtattccactgagttttggggtt 300
| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 529 tgatgaaacttgtgttttatgtgcacagaagactaatgtagtccactgagttttggggtt 470
Query: 301 tgttttgttttgttttatgcttatttaggaggaaaaattggcctggaactttacatttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgttttgttttgttttatgcttatttaggaggaaaaattggcctggaactttacatttgt 410
Query: 361 agaacagacatcctttctagggatagttgtagcagccattagtacagtgttttccatttc 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 409 agaacagacatcctttctagggatagttgaagcagccattagtacagtgttttccatttc 350
Query: 421 tgaaataagttctcacatgttttgactttccttaatgtgaacagtctgcagttggacttt 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgaaataagttctcacatgctttgactttccttaatgtgaacagtctgcagttggacttt 290
Query: 481 tacttcaaatttttagcaattttca-ttttttttaacttattgtagctcacaaaaatttc 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 289 tacttcaaatttttagcaattttcatttttttttaacttattgtagctcacaaaaatttc 230
Query: 540 ttgatattttctgaacctttcatggacta 568
|||||||||||||||||||||||||||||
Sbjct: 229 ttgatattttctgaacctttcatggacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space: 535122
Effective search space used: 535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
