Query= MSMg01no482_a01.b1 MSMg01no482_a01.b1 CHROMAT_FILE:
MSMg01no482_a01.b1 PHD_FILE: MSMg01no482_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:49 2005
(575 letters)
>mm_chr11_82729574_82730548
Length = 975
Score = 785 bits (406), Expect = 0.0
Identities = 421/426 (98%)
Strand = Plus / Minus
Query: 1 cactgcccctctttgggcatcgacatccaagctctgacagaaataaatgaaaaatatttc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 426 cactgcccctctttgggcatcggcatccaagctctgacagaaataaatgaaaaatatttc 367
Query: 61 gatgttcactagaagactggagaaaaacatgagacagatcaaaccgtttggttacaatga 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gatgttcactggaagactggagaaaaacatgagacagatcaaaccgtttggttacaatga 307
Query: 121 ctgttaccagtaaatatttcaaaaaattttttaatgtgtcagcatgacctcttggcagta 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 306 ctgttaccagtaaatatttcaaaaaaatttttaatgtgtcagcatgacctcttggcagta 247
Query: 181 ttcctaaatgaaacaaagcattatttgaatgtgccagtgtttcttgggatcaaaattaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttcctaaatgaaacaaagcattatttgaatgtgccagtgtttcttgggatcaaaattaca 187
Query: 241 gtgaggcaagttagatatccctcataggtgtaaaactcgagacaacaaatagcccaatat 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 186 gtgaggcaagttagatatccctcataggtgtaaaacttgagacaacaaatagcccaatat 127
Query: 301 ccagatgagtgatgtttaatgaaatactttttaatcagaatcaaggccaaaatttcaata 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ccagatgtgtgatgtttaatgaaatactttttaatcagaatcaaggccaaaatttcaata 67
Query: 361 aacaaaatatctgattttaaacaacaatgtcatccgactctgctgtttaatttgccacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aacaaaatatctgattttaaacaacaatgtcatccgactctgctgtttaatttgccacaa 7
Query: 421 tgactt 426
||||||
Sbjct: 6 tgactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_a01.g1 MSMg01no482_a01.g1 CHROMAT_FILE:
MSMg01no482_a01.g1 PHD_FILE: MSMg01no482_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:49 2005
(582 letters)
>mm_chr11_82537951_82538932
Length = 982
Score = 1013 bits (524), Expect = 0.0
Identities = 569/584 (97%), Gaps = 4/584 (0%)
Strand = Plus / Plus
Query: 1 tggtcactaagccagctctaaaatactcaa-ggaatcttagggctgaaaagaaagataga 59
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tggtcactaagccagctctaaaatactcaaaggaatcttagggctgaaaagaaagataga 260
Query: 60 ccgcgggattacagcaaagagtgagtgttcgtggagattgaacagttgggttactgatga 119
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ccgtgggattacagcaaagagtgagtgttcatggagattgaacagttgggttactgatga 320
Query: 120 aatcagaaagcacgtaaattttagagttaaatgaaaatgaagacatagcataccaaaact 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcagaaagcaagtaaattttagagttaaatgaaaatgaagacatagcataccaaaact 380
Query: 180 atgagatacaataaaaacagcaccaatttaaggaaggaggaggatactacaacaaatgcc 239
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atgagatacaataaaaacagcaccaatttaaggaaggaggaagatactacaacaaatgcc 440
Query: 240 aatagaattcgggaagtcctaaggacaaaccttgaaaaagtataagtatattccactaaa 299
|||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 aatagaatccaggaagtcctaaggacaaaccttgaaaaggtataagtatattccactaaa 500
Query: 300 ttggaacacctaagaaaaac-gaatgactttctagaaatatgtgatctaccaaaaataaa 358
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttggaacacctaagaaaaacaga-tgactttctagaaatatgtgatctaccaaaaataaa 559
Query: 359 ccgagacaggcaatttgaatattactataacaagcagtgaaactgacaaagaaataaaac 418
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 560 ccgagacaggcaatttgaatattactataacaagcaatgaaactga-aaagaaataaaac 618
Query: 419 aaacacccagtcaagaaagcccgggctgtgcgaggagctgttacagagctggagctgctg 478
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 619 aaacacccagtcaagaaagcccgggctgtgcgaggagctgttacagagcaaaagctgctg 678
Query: 479 attaagcctgatcaagatgtctcaaactctacaccaagactccgtggcagagcccactgg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 attaagcctgatcaagatgtctcaaactctacaccaagactccgtggcagagcccactgg 738
Query: 539 tggtggggagcggggagggggaacgggggtgggtaaagtcagtg 582
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tggtggggagcggggagggggaacgggggtgggtaaagtcagtg 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
