Query= MSMg01no482_g10.b1 MSMg01no482_g10.b1 CHROMAT_FILE:
MSMg01no482_g10.b1 PHD_FILE: MSMg01no482_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:18 2005
(575 letters)
>mm_chr11_114833103_114834077
Length = 975
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%)
Strand = Plus / Minus
Query: 234 tgttttagttttcttatttgggtgcttagcctgcctgtttcctgtgccctgtatgtgagg 293
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tgttttagttttcatatttgggtgcttagcctgcctgtttcctgtgccctgtatgtgagg 916
Query: 294 ctggtactcacagaggccctaagaatccattgaaagggaggtatagatgcttgtgagctg 353
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 ctggtgctcacagaggccctaagaatccattgaaagggaggtatagatgcttgtgagctg 856
Query: 354 ctctataaatgttgggaatcaaacctagtcttaaggaagagcatcatggtccttaactgc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ctctataaatgttgggaatcaaacctagtcttaaggaagagcatcatggtccttaactgc 796
Query: 414 tgcaccatctctccagttcctggagtgttttccaaaaagatttattgttgttgttgtcgt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgcaccatctctccagttcctggagtgttttccaaaaagatttattgttgttgttgtcgt 736
Query: 474 tgtcatcatcatcatcatattttaaagttatgtgtacctgtatgtgggtatatgcatgag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgtcatcatcatcatcatattttaaagttatgtgtacctgtatgtgggtatatgcatgag 676
Query: 534 agtgcaggtgtccatgttgtgcaacaatggatgccaattcta 575
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agtgcaggtgtccatgttgtgcaacaatggatgccaattcta 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_g10.g1 MSMg01no482_g10.g1 CHROMAT_FILE:
MSMg01no482_g10.g1 PHD_FILE: MSMg01no482_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:18 2005
(195 letters)
>mm_chr11_114662952_114663546
Length = 595
Score = 292 bits (151), Expect = 9e-84
Identities = 185/199 (92%), Gaps = 5/199 (2%)
Strand = Plus / Plus
Query: 2 ctcattgccgccaagga-----ggcctggtgaaatcctctcatgatccctgtgtggccac 56
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 197 ctcattgccgccaaggaggcctggcctggtgaaatcctctcaggatccctgtgtggccac 256
Query: 57 caggggcaggcagcaagcttccactgtgagaataaaaatgagtcttaggatcaggtgggc 116
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 257 caggggcaggcagcaagcttctactgtgagaataaaaatgagccttaggatcaggtggat 316
Query: 117 tggctccagcctatgcatgggatttacctcagggaaccaggaaatgcctgtcattcccac 176
|||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggctctagcccaggcatgggatttacctcagggaaccaggaaatgcctgtcattcccac 376
Query: 177 cacagttgctagtacattt 195
|||||||||||| ||||||
Sbjct: 377 cacagttgctagcacattt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
