Query= MSMg01no482_g18.b1 MSMg01no482_g18.b1 CHROMAT_FILE:
MSMg01no482_g18.b1 PHD_FILE: MSMg01no482_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:19 2005
(531 letters)
>mm_chr11_60715328_60716260
Length = 933
Score = 967 bits (500), Expect = 0.0
Identities = 525/534 (98%), Gaps = 3/534 (0%)
Strand = Plus / Plus
Query: 1 agaccaggctggcctcgaactcagaaatctgcctgcctctgtctcctgagtgctgggatt 60
||||||| ||||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 200 agaccagtctggcctcgaactcagaaatctgcctgcctctgcctcccgagggctgggatt 259
Query: 61 -aaaggtgtgcgccaccacggccagctgagaagtgcctctgcttaatctgatggtgtggg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taaaggtgtgcgccaccacggccagctgagaagtgcctctgcttaatctgatggtgtggg 319
Query: 120 ctgccagctctgtacaccacagggcctggctgctggcctgaaacctactcgtcagagcct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgccagctctgtacaccacagggcctggctgctggcctgaaacctactcgtcagagcct 379
Query: 180 tacccagtacattttcaattagtggtttgtttttttt--gtgtgtgtgttaagaatatcg 237
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 tacccagtacattttcaattagtggtttgttttttttttgtgtgtgtgttaagaatatcg 439
Query: 238 taactcctgttatttgttcttcagggagaaccctcagaggccacgtgattatggtgttga 297
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taactcctggaatttgttcttcagggagaaccctcagaggccacgtgattatggtgttga 499
Query: 298 tattcctccagcttcctgtaatctgaggaactttgagaattttaacattttcagaagttc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tattcctccagcttcctgtaatctgaggaactttgagaattttaacattttcagaagttc 559
Query: 358 tctgccctaaatcccacatcagtacctgagtgctcttcgttcttcggtgcaggctgacat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctgccctaaatcccacatcagtacctgagtgctcttcgttcttcggtgcaggctgacat 619
Query: 418 tgctggtattgggactgacttcctggaaagttgcccaaagttgtaaacacgggattgctg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgctggtattgggactgacttcctggaaagttgcccaaagttgtaaacacgggattgctg 679
Query: 478 atctgtccccaccaggacatgattctaatgctggggaaaatggacccctaaaac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atctgtccccaccaggacatgattctaatgctggggaaaatggacccctaaaac 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 933
Length adjustment: 10
Effective length of query: 521
Effective length of database: 923
Effective search space: 480883
Effective search space used: 480883
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_g18.g1 MSMg01no482_g18.g1 CHROMAT_FILE:
MSMg01no482_g18.g1 PHD_FILE: MSMg01no482_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:20 2005
(492 letters)
>mm_chr11_60880196_60881087
Length = 892
Score = 913 bits (472), Expect = 0.0
Identities = 487/492 (98%)
Strand = Plus / Minus
Query: 1 ccatctggacagcacagttcctggccacatctacatcagaggttcagagggacatggcct 60
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ccatctggacagcacaatccctggccacatctacatcagaggttcagagggacatggcct 633
Query: 61 gcagactctgccaccaacagaggcatgggtggagaccagtagaccagacagctcaggaag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcagactctgccaccgacagaggcatgggtggagaccagtagaccagacagctcaggaag 573
Query: 121 gattcccagggtctatgtcatgagccatagtgctactgcctggcagacacagacacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gattcccagggtctatgtcatgagccatagtgctactgcctggcagacacagacacagct 513
Query: 181 atgaagcttgagagccacagaaagagttcgtcaggcatggggcaaaacagccaagagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atgaagcttgagagccacagaaagagttcgtcaggcatggggcaaaacagccaagagcct 453
Query: 241 caagacatcctttaatggccaaggagggtttttaaagggtaaaggtactcccaaccaaga 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caagacatcctttaacggccaaggagggtttttaaagggtaaaggtactcccaaccaaga 393
Query: 301 catacgggttccaacaggagagtcgagatctaaccctcatgtctaatgcaaggtatccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 catacgggttccaacaggagagtcgagatctaaccctcatgtctaatgcaaggtatccta 333
Query: 361 ccacggaacctcaggccctacagggccacctgtcctcactttctctcctacagctgtttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccacggaacctcaggccctacagggccacctgtcctcactttctctcctacagctgtttc 273
Query: 421 cgtcgatcacctcaccatgggcttgtttagctgaggctcggggctgtaatggtggatgct 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 272 cgtcgatcacctcaccatgggcttgtttagctgaggcttggggctgtaatggtggatgct 213
Query: 481 gtttctgtctag 492
||||||||||||
Sbjct: 212 gtttctgtctag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
