Query= MSMg01no483_o11.b1 MSMg01no483_o11.b1 CHROMAT_FILE:
MSMg01no483_o11.b1 PHD_FILE: MSMg01no483_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:16 2005
(556 letters)
>mm_chr11_67419271_67420226
Length = 956
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Minus
Query: 318 gctgacatacatactctctccatgactattcatgctacagtgataaagttgagctatgac 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gctgacatacatactctctccatgactattcatgctacagtgataaagttgagctatgac 697
Query: 378 acagaccctgacctttcagctctaacctaattagtgcccggtctgttagagactccgctt 437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agagaccctgacctttcagctctaacctaattagtgcccggtctgttagagactccgctt 637
Query: 438 gccaacccgaggatcaccctgtatgccacaactccaagaaagctctgacctattggtata 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gccaacccgaggatcaccctgtatgccacaactccaagaaagctctgacctattggtata 577
Query: 498 taaaaagtcagaatcctggaaggaagctgtcagataccatcggtggatataaaatgtgg 556
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taaaaagtcagaatcctggaaggaagctgtcagataccatcggtggatataaaatgtgg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_o11.g1 MSMg01no483_o11.g1 CHROMAT_FILE:
MSMg01no483_o11.g1 PHD_FILE: MSMg01no483_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:16 2005
(341 letters)
>mm_chr11_67255617_67256356
Length = 740
Score = 632 bits (327), Expect = 0.0
Identities = 333/335 (99%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 1 aggttggtttatgatcactattctagtctaggatagtgtgaacctgagccgcctgccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggttggtttatgatcactattctagtctaggatagtgtgaacctgagccgcctgccatc 260
Query: 61 cagatatgtcccctgtcctgggaagagagggtggaagtgagggtgacataactatcatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatatgtcccctgtcctgggaagagagggtggaagtgagggtgacataactatcatgt 320
Query: 121 caggttaggtcacaggacctgaaaggcgttgggattctttgcaatggaagttagaatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggttaggtcacaggacctgaaaggcgttgggattctttgcaatggaagttagaatcag 380
Query: 181 agacaagtgagcctagaagctttcctatctgagagagattggcaagggagaggagaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacaagtgagcctagaagctttcctatctgagagagattggcaagggagaggagaacaa 440
Query: 241 ggatgtgtgtggggccctcaggcccagtggtctctctgagtgggatcatgtgaaaggagg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ggatgtgtgtggggccctcaggcccagtggtctctctgagtggggtcatgtgaaaggagg 500
Query: 301 aaggagtgagaatacatgtgtagtgggggngagag 335
||||||||||||||||||||||||||||| |||||
Sbjct: 501 aaggagtgagaatacatgtgtagtggggg-gagag 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 740
Length adjustment: 9
Effective length of query: 332
Effective length of database: 731
Effective search space: 242692
Effective search space used: 242692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
