Query= MSMg01no483_o20.b1 MSMg01no483_o20.b1 CHROMAT_FILE:
MSMg01no483_o20.b1 PHD_FILE: MSMg01no483_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:18 2005
(567 letters)
>mm_chr11_48574366_48575335
Length = 970
Score = 779 bits (403), Expect = 0.0
Identities = 420/429 (97%), Gaps = 7/429 (1%)
Strand = Plus / Minus
Query: 146 ctttgagaccccgtgtatgtccttttccttatcaatctgtgacatgctagagtttcagca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ctttgagaccccgtgtatgtccttttccttatcaatctgtgacatgctagagtttcagca 911
Query: 206 tccaatgatgtttcatgtctaaattagtcagcattatgaaggttgccatggtgtccaact 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tccaatgatgtttcatgtctaaattagtcagcattatgaaggttgccatggtgtccaact 851
Query: 266 tattccttatattataaaacactactgctaatttttctgtttttatgcacacact----c 321
|||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 850 tattccatagattataaaacactactgctaatttttctgtttttatgcacacactcacac 791
Query: 322 acacacacacacacacacacctgtggaggtcggaggtatcctgttccaccctttccactt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 acacacacacacacacacacctgtggaggtcggaggtatcctgttccaccctttccactt 731
Query: 382 tattttttgtaggcagggcaataatattgaattgggtgcagggagaggaacattaactag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tattttttgtaggcagggcaataatattgaattgggtgcagggagaggaacattaactag 671
Query: 442 agtatgcacagtggctatcagtgacccaggtgattctgacattattagaagcagggccag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agtatgcacagtggctatcagtgacccaggtgattctgacattattagaagcagggccag 611
Query: 502 aacagactgataaaagtaaacaagaaaagctttcttt---aaaaaaaaaaaactttgcaa 558
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 610 aacagactgataaaagtaaacaagaaaagctttctttaaaaaaaaaaaaaaactttgcaa 551
Query: 559 gaactcctt 567
|||||||||
Sbjct: 550 gaactcctt 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 970
Length adjustment: 10
Effective length of query: 557
Effective length of database: 960
Effective search space: 534720
Effective search space used: 534720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_o20.g1 MSMg01no483_o20.g1 CHROMAT_FILE:
MSMg01no483_o20.g1 PHD_FILE: MSMg01no483_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:18 2005
(593 letters)
>mm_chr11_48412012_48413004
Length = 993
Score = 1108 bits (573), Expect = 0.0
Identities = 588/593 (99%)
Strand = Plus / Plus
Query: 1 atttcccagcacctctatagcagatcacaatcacctgtaacttcagtcccaggggcgtct 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 atttcccagcacctctatagcagatcccaatcacctgtaacttcagtcccaggggcgtct 260
Query: 61 gacaccctgttctagtctcttcagggcaccaagcatgcattggtgccctgctgcatacag 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gacaccctgttctagtctcttcagggcaccaagcatgcattggtgcactgctgcatacag 320
Query: 121 gtaaaacattcttacatgtaaaactttttaaatgaaagaagaggaaaagaaggaagatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaaacattcttacatgtaaaactttttaaatgaaagaagaggaaaagaaggaagatac 380
Query: 181 ccaaaataatgatattgggacaaacaggcaaatatacaagatagctaacaaataagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaaataatgatattgggacaaacaggcaaatatacaagatagctaacaaataagagac 440
Query: 241 aaaattccgaagaagaacaaatatcagaatgagatttcttccatgtagctctcaaggtca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatttcgaagaagaacaaatatcagaatgagatttcttccatgtagctctcaaggtca 500
Query: 301 aaggtaaaccttataggcgggtgttagagaaaggcagcttcttggctcaataaaaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtaaaccttataggcgggtgttagagaaaggcagcttcttggctcaataaaaaaggc 560
Query: 361 acatgccagtaaattatcataagcaatgcacattgtttgtaactcaagatcaaaggcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 acatgccagtaaattatcataagcaatgcacattgtttgtaactcaagatcaaagacagt 620
Query: 421 aacaaatctgtctttgacaggctgctttccaagttcacaaaagagtgttggacactagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaaatctgtctttgacaggctgctttccaagttcacaaaagagtgttggacactagag 680
Query: 481 ctgagaatacataatggaatcagaaattcttagtttcctgaatacgaaatccaacaccct 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 ctgagaatacataatggaatcagaaattcttagtttcctgaatactaaatccaacaccct 740
Query: 541 gtaagactgatctcaaattgatggattcatggcctcccaagtgggtcttggct 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtaagactgatctcaaattgatggattcatggcctcccaagtgggtcttggct 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
