NNNNAATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGAT
CCGCGGAATTCAAGGACATCCTCCACTTTCTGTTCTATCAGGTTTAGTAT
ATATGGTTTTATGTTGAGGTCTTTGATCCATTTGAATTTGAGTTTTGCTC
AGGGTGTTAGATTATGGATCTATTTACCTTCTTCTTCATGCAGACATCCA
GTTAGACCAGCACCATTTGTTAAAGATGCTTTCTTTTTTTCTATGGTTTG
GTTTTGGCTTCTTTGTTAAAAATCAAGTGTCCATAAATGTGTGGCTTTTC
TTCTGGGTCTTCAATTTGATTCCATTGATAAAACTCATCAATTTTCATGC
TAATACTATGGAGTTTTTATTACTATTGCTCCTTAGTACAGCTTGAAATC
AGGGATGGTGATACCTCCAGAAGTTCTTTTATTGTACAGGATTGTTTTAG
TTATCCTGGGTTTAGTCTCCTACTGTTCATGTGTGGAGTTCAACGTGTGA
CTTAGTCTTAGTAGTGTTTCTTTTACAACTGTGGGTGTCCTTTCATTTGG
GGCACAGATATTCTGAATTTGAGTCATTAATATTGTTGGATTTTTTTTCC
TTTGATTAGTATGAAGTGTATCTTTCTCCATCTCTTTTGATTAATTTTGG
TCGAGAGTATACTTTACTAGATATTAGAGTGGCTACTTCAGCTTGCTTCT
TGGGACCTTTTGCTTGAAAAACTTTACTCTGAGGTATGTTTGATG

NNNNNNCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGGCCGATGCTTCTTA
TGTTTACTGATTATTTATCCTCTACATGGACTTGAGTTTTATTAAGAATT
TTTCAGTTACTAAACTTTGTAGGCAACTTAAGTAACAGTGTTTTCTCAGC
TTCAGAGCATCTTCTGAATGTCTGCTATCTTAGATAAAAAACGTTTACTT
TCTTCCAAGTGTGTATGGGAGGTTATTTATTGTATCTTTGTAAAAGTATG
TTTTTATGATGGAAACTTTGACATTTCTAGTGTGATATCTTATGAAATAT
ATTCCCTTCCCTCATGATGTTCATTTTCTTTTGCTGTTGGGGAACAAACC
CAGGTCCTATGTATACAGGGCAAGTGGTGCTAATTCTCTAGTCTTTTTTT
TTTTTTTTTCACTCTTGTCAATCATATATAATTATTGTAGGGTTTTTAAT
TCAATAGATACATATAAACCTTTTCTTTTTTTTTAATTAGATACTTTCCA
GCAGATTCAACAGCAGAAATGTTAGAAGAATGGCGGCCTTTAATGTGTCC
TTTTGATGTAACAATGCAAAAGGCCATCAGTTATTTTGAAATATTTCTTC
CTACCTCCCTTCCTCCAGAACTGCATCATAAAGGTTTTAAGTAAGTGTGC
ATATTTGACATGCTCTAGGATACAGCAAGAATACAA

Query= MSMg01no485_b10.g1 MSMg01no485_b10.g1 CHROMAT_FILE:
MSMg01no485_b10.g1 PHD_FILE: MSMg01no485_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:54 2005
         (536 letters)



>mm_chr11_30703629_30704567
          Length = 939

 Score = 1027 bits (531), Expect = 0.0
 Identities = 536/539 (99%), Gaps = 3/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgggccgatgcttcttatgtttactgattatttatcctctacatggacttgagttttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggccgatgcttcttatgtttactgattatttatcctctacatggacttgagttttat 260

                                                                       
Query: 61  taagaatttttcagttactaaactttgtaggcaacttaagtaacagtgttttctcagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagaatttttcagttactaaactttgtaggcaacttaagtaacagtgttttctcagctt 320

                                                                       
Query: 121 cagagcatcttctgaatgtctgctatcttagataaaaaacgtttactttcttccaagtgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagcatcttctgaatgtctgctatcttagataaaaaacgtttactttcttccaagtgt 380

                                                                       
Query: 181 gtatgggaggttatttattgtatctttgtaaaagtatgtttttatgatggaaactttgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatgggaggttatttattgtatctttgtaaaagtatgtttttatgatggaaactttgac 440

                                                                       
Query: 241 atttctagtgtgatatcttatgaaatatattcccttccctcatgatgttcattttctttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttctagtgtgatatcttatgaaatatattcccttccctcatgatgttcattttctttt 500

                                                                       
Query: 301 gctgttggggaacaaacccaggtcctatgtatacagggcaagtggtgctaattctctagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgttggggaacaaacccaggtcctatgtatacagggcaagtggtgctaattctctagt 560

                                                                       
Query: 361 ctttttttttttttttt---cactcttgtcaatcatatataattattgtagggtttttaa 417
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttttttttttttttttttcactcttgtcaatcatatataattattgtagggtttttaa 620

                                                                       
Query: 418 ttcaatagatacatataaaccttttctttttttttaattagatactttccagcagattca 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcaatagatacatataaaccttttctttttttttaattagatactttccagcagattca 680

                                                                      
Query: 478 acagcagaaatgttagaagaatggcggcctttaatgtgtccttttgatgtaacaatgca 536
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagcagaaatgttagaagaatggcggcctttaatgtgtccttttgatgtaacaatgca 739


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 939
Length adjustment: 10
Effective length of query: 526
Effective length of database: 929
Effective search space:   488654
Effective search space used:   488654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)